{"title":"NifEN: a versatile player in nitrogenase assembly, catalysis and evolution.","authors":"Yilin Hu, Markus W Ribbe","doi":"10.1007/s00775-024-02086-6","DOIUrl":null,"url":null,"abstract":"<p><p>The Mo-nitrogenase catalyzes the reduction of N<sub>2</sub> to NH<sub>3</sub> at the cofactor of its catalytic NifDK component. NifEN shares considerable homology with NifDK in primary sequence, tertiary structure and associated metallocenters. Better known for its biosynthetic function to convert an all-iron precursor (L-cluster; [Fe<sub>8</sub>S<sub>9</sub>C]) to a mature cofactor (M-cluster; [(R-homocitrate) MoFe<sub>7</sub>S<sub>9</sub>C]), NifEN also mimics NifDK in catalyzing substrate reduction at ambient conditions. The recently discovered ability of NifEN to reduce N<sub>2</sub> to NH<sub>3</sub> is particularly interesting, as it points to NifEN as a plausible, prototype ancient nitrogenase during evolution. Moreover, the dual function of NifEN in assembly and catalysis makes it a great template to reconstruct the functional variants or equivalents of NifDK, which could facilitate the mechanistic investigation and heterologous synthesis of nitrogenase. This perspective provides an overview of our recent studies of NifEN, with a focus on the implications of its functional versatility for nitrogenase assembly, catalysis and evolution.</p>","PeriodicalId":603,"journal":{"name":"Journal of Biological Inorganic Chemistry","volume":" ","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biological Inorganic Chemistry","FirstCategoryId":"1","ListUrlMain":"https://doi.org/10.1007/s00775-024-02086-6","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
The Mo-nitrogenase catalyzes the reduction of N2 to NH3 at the cofactor of its catalytic NifDK component. NifEN shares considerable homology with NifDK in primary sequence, tertiary structure and associated metallocenters. Better known for its biosynthetic function to convert an all-iron precursor (L-cluster; [Fe8S9C]) to a mature cofactor (M-cluster; [(R-homocitrate) MoFe7S9C]), NifEN also mimics NifDK in catalyzing substrate reduction at ambient conditions. The recently discovered ability of NifEN to reduce N2 to NH3 is particularly interesting, as it points to NifEN as a plausible, prototype ancient nitrogenase during evolution. Moreover, the dual function of NifEN in assembly and catalysis makes it a great template to reconstruct the functional variants or equivalents of NifDK, which could facilitate the mechanistic investigation and heterologous synthesis of nitrogenase. This perspective provides an overview of our recent studies of NifEN, with a focus on the implications of its functional versatility for nitrogenase assembly, catalysis and evolution.
mo -氮酶在其催化组分NifDK的辅因子处催化N2还原为NH3。NifEN与NifDK在一级序列、三级结构和伴生金属中心上具有相当大的同源性。以其转化全铁前体(l簇)的生物合成功能而闻名;[Fe8S9C])为成熟辅因子(m -簇);[(r -均柠檬酸盐)MoFe7S9C]), NifEN也模仿NifDK在环境条件下催化底物还原。最近发现的NifEN将N2还原为NH3的能力特别有趣,因为它表明NifEN在进化过程中是一种可信的原型古氮酶。此外,NifEN在组装和催化方面的双重功能使其成为重建NifDK功能变体或等同物的良好模板,这有助于研究氮酶的机制和异源合成。这一观点概述了我们最近对NifEN的研究,重点关注其在氮酶组装、催化和进化中的功能多样性。
期刊介绍:
Biological inorganic chemistry is a growing field of science that embraces the principles of biology and inorganic chemistry and impacts other fields ranging from medicine to the environment. JBIC (Journal of Biological Inorganic Chemistry) seeks to promote this field internationally. The Journal is primarily concerned with advances in understanding the role of metal ions within a biological matrix—be it a protein, DNA/RNA, or a cell, as well as appropriate model studies. Manuscripts describing high-quality original research on the above topics in English are invited for submission to this Journal. The Journal publishes original articles, minireviews, and commentaries on debated issues.