Identification of ABC transporter Cdr1 inhibitors of Candida glabrata.

IF 3.8 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Archives of biochemistry and biophysics Pub Date : 2024-12-15 DOI:10.1016/j.abb.2024.110270
Mohd Waseem, Shubhashis Das, Debarati Mondal, Anuj Kumari, Ritu Kulshreshtha, Jitendra K Thakur, Naidu Subbarao
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Abstract

Candida glabrata is one of the most common causes of invasive candidiasis. Rising treatment failures from resistance to current antifungal drugs highlight the need for new antifungals. Overexpression of efflux pump transporter genes is significantly associated with the development of multidrug resistance. In this study, we have identified novel and potential inhibitors of ABC transporter Cdr1 of Candida glabrata (CgCdr1) by employing high throughput virtual screening of large chemical datasets from five different chemical libraries (ZINC, DrugBank, ChemDiv antifungal, ChemDiv Kinases, and ChEMBL bioassay). As a result many molecules were predicted to have higher binding affinity toward the CgCdr1, in which a naturally occurring compound, pentagalloyl glucose, was identified to significantly reduce the growth of Candida glabrata with an IC50 value of 16.97 ± 2.1 μM. Molecular dynamics studies showed stable binding of pentagalloyl glucose with CgCdr1 protein. In summary, our research identifies pentagalloyl glucose as a novel antifungal compound that has the potential to be used for inhibiting the growth of Candida glabrata.

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念珠菌是侵袭性念珠菌病最常见的病因之一。由于对现有抗真菌药物产生耐药性,治疗失败率不断上升,这凸显了对新型抗真菌药物的需求。外排泵转运体基因的过度表达与多药耐药性的产生密切相关。在这项研究中,我们通过对来自五个不同化学库(ZINC、DrugBank、ChemDiv antifungal、ChemDiv Kinases 和 ChEMBL bioassay)的大型化学数据集进行高通量虚拟筛选,确定了新型和潜在的光滑念珠菌 ABC 转运体 Cdr1(CgCdr1)抑制剂。结果预测出许多分子对 CgCdr1 有较高的结合亲和力,其中一种天然化合物五聚酰基葡萄糖被确认能显著减少白色念珠菌的生长,其 IC50 值为 16.97 ± 2.1 μM。分子动力学研究表明,五聚甲基葡萄糖与 CgCdr1 蛋白稳定结合。综上所述,我们的研究发现五聚酰基葡萄糖是一种新型抗真菌化合物,有望用于抑制念珠菌的生长。
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来源期刊
Archives of biochemistry and biophysics
Archives of biochemistry and biophysics 生物-生化与分子生物学
CiteScore
7.40
自引率
0.00%
发文量
245
审稿时长
26 days
期刊介绍: Archives of Biochemistry and Biophysics publishes quality original articles and reviews in the developing areas of biochemistry and biophysics. Research Areas Include: • Enzyme and protein structure, function, regulation. Folding, turnover, and post-translational processing • Biological oxidations, free radical reactions, redox signaling, oxygenases, P450 reactions • Signal transduction, receptors, membrane transport, intracellular signals. Cellular and integrated metabolism.
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