{"title":"A Novel Organic Solvent Tolerant NAD+-dependent Formate Dehydrogenase from Halophilic Yeast Candida diddensiae","authors":"G. Kurt-Gür, E. Arslan, Ö. Başsaraç, E. Ordu","doi":"10.1134/S000368382460012X","DOIUrl":null,"url":null,"abstract":"<p>Characterization of new halophilic enzymes capable of thriving in non-aqueous biocatalysis of significant interest in the non-aqueous chemoenzymatic processes. Despite the number of studies dealing with increasing the stability of NAD<sup>+</sup>-dependent formate dehydrogenases (FDHs), there are few studies characterizing their behavior in organic solvents. FDHs have a great advantage in cofactor regeneration systems and the reduction of CO<sub>2</sub> to formate. It is important to find novel FDHs for the wide application field of organic chemicals. In this study, a novel NAD<sup>+</sup>-dependent formate dehydrogenase from <i>Candida diddensiae</i> YLP9 (CdFDH)<i>,</i> isolated from olive brine and having tolerance under low pH and high salt concentration, was heterologously expressed and characterized. Recombinant CdFDH has optimum activity at pH 7.0–8.0 when the substrate is formate. The midpoint of thermal inactivation (T<sub>0.5</sub>) for CdFDH was calculated as 54°C. The enzyme shows high stability at рН 6.0 and 53°С (<span>\\(k_{{{\\text{in}}}}^{{{\\text{ef}}}}\\)</span> 0.28 × 10<sup>–4</sup> /s). Comparing the enzyme activity results obtained from incubation of enzyme in media without salt and with different concentrations of NaCl, KCl, and MgCl<sub>2</sub> revealed that concentrations of NaCl and KCl between 0.4–4.0 M contribute to proper folding and activity of CdFDH. Enzyme activity was preserved and significantly increased after incubating in the 20–80% of DMSO, 40% 3-methyl butanol, 70% <i>n</i>-butanol and, all tested concentrations of <i>n</i>-hexane. The results show that NAD<sup>+</sup>-dependent CdFDH is a promising candidate biocatalyst to use in non- or low-aqueous biotechnological applications.</p>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 6","pages":"1162 - 1170"},"PeriodicalIF":1.0000,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Applied Biochemistry and Microbiology","FirstCategoryId":"99","ListUrlMain":"https://link.springer.com/article/10.1134/S000368382460012X","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Characterization of new halophilic enzymes capable of thriving in non-aqueous biocatalysis of significant interest in the non-aqueous chemoenzymatic processes. Despite the number of studies dealing with increasing the stability of NAD+-dependent formate dehydrogenases (FDHs), there are few studies characterizing their behavior in organic solvents. FDHs have a great advantage in cofactor regeneration systems and the reduction of CO2 to formate. It is important to find novel FDHs for the wide application field of organic chemicals. In this study, a novel NAD+-dependent formate dehydrogenase from Candida diddensiae YLP9 (CdFDH), isolated from olive brine and having tolerance under low pH and high salt concentration, was heterologously expressed and characterized. Recombinant CdFDH has optimum activity at pH 7.0–8.0 when the substrate is formate. The midpoint of thermal inactivation (T0.5) for CdFDH was calculated as 54°C. The enzyme shows high stability at рН 6.0 and 53°С (\(k_{{{\text{in}}}}^{{{\text{ef}}}}\) 0.28 × 10–4 /s). Comparing the enzyme activity results obtained from incubation of enzyme in media without salt and with different concentrations of NaCl, KCl, and MgCl2 revealed that concentrations of NaCl and KCl between 0.4–4.0 M contribute to proper folding and activity of CdFDH. Enzyme activity was preserved and significantly increased after incubating in the 20–80% of DMSO, 40% 3-methyl butanol, 70% n-butanol and, all tested concentrations of n-hexane. The results show that NAD+-dependent CdFDH is a promising candidate biocatalyst to use in non- or low-aqueous biotechnological applications.
表征新的嗜盐酶能够蓬勃发展的非水生物催化在非水化学酶的过程中具有重要意义。尽管有许多研究涉及提高NAD+依赖性甲酸脱氢酶(FDHs)的稳定性,但很少有研究表征其在有机溶剂中的行为。FDHs在辅助因子再生系统和减少二氧化碳生成方面具有很大的优势。寻找新型外源性毒物对有机化学品的广泛应用具有重要意义。本研究从橄榄盐水中分离出一种新的NAD+依赖性甲酸脱氢酶(CdFDH),该酶具有耐低pH和高盐浓度的特性。当底物为甲酸时,重组CdFDH在pH 7.0-8.0时活性最佳。计算CdFDH的热失活中点(T0.5)为54℃。该酶在рН 6.0和53°С (\(k_{{{\text{in}}}}^{{{\text{ef}}}}\) 0.28 × 10-4 /s)下具有较高的稳定性。比较无盐培养基和不同浓度NaCl、KCl和MgCl2培养基中酶活性的结果表明,NaCl和KCl浓度在0.4-4.0 M之间有利于CdFDH的正常折叠和活性。酶活性在20 ~ 80℃孵育后得到保存并显著提高% of DMSO, 40% 3-methyl butanol, 70% n-butanol and, all tested concentrations of n-hexane. The results show that NAD+-dependent CdFDH is a promising candidate biocatalyst to use in non- or low-aqueous biotechnological applications.
期刊介绍:
Applied Biochemistry and Microbiology is an international peer reviewed journal that publishes original articles on biochemistry and microbiology that have or may have practical applications. The studies include: enzymes and mechanisms of enzymatic reactions, biosynthesis of low and high molecular physiologically active compounds; the studies of their structure and properties; biogenesis and pathways of their regulation; metabolism of producers of biologically active compounds, biocatalysis in organic synthesis, applied genetics of microorganisms, applied enzymology; protein and metabolic engineering, biochemical bases of phytoimmunity, applied aspects of biochemical and immunochemical analysis; biodegradation of xenobiotics; biosensors; biomedical research (without clinical studies). Along with experimental works, the journal publishes descriptions of novel research techniques and reviews on selected topics.