Genome sequence data for 61 isolates of Xanthomonas campestris pv. campestris from Brassica crops in Serbia.

Access microbiology Pub Date : 2024-11-08 eCollection Date: 2024-01-01 DOI:10.1099/acmi.0.000870.v3
Tatjana Popović Milovanović, Shannon Greer, Renata Iličić, Aleksandra Jelušić, Daisy Bown, Mikaeel Hussain, Jamie Harrison, Murray Grant, Joana G Vicente, David J Studholme
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Abstract

This Technical Resource describes genome sequencing data for 61 isolates of the bacterial pathogen Xanthomonas campestris pv. campestris collected from Brassica and Raphanus crops between 2010 and 2021 in Serbia. We present the raw sequencing reads and annotated contig-level genome assemblies and determine the races of ten isolates. The data can be used to test hypotheses and phylogeographic analyses and inform the design of informative molecular markers for population genetics studies. When combined with phenotypic data, they could be used to dissect relationships between genotypes and phenotypes such as host range and virulence. Finally, these genome sequences expand our inventory of plasmids known to reside in this pathogen.

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61株油菜黄单胞菌基因组序列数据。来自塞尔维亚芸苔属作物的campestris。
本技术资源描述61株细菌病原菌油菜黄单胞菌pv的基因组测序数据。2010年至2021年期间在塞尔维亚从芸苔属和莴苣属作物中收集的campestris。我们提出了原始测序读数和注释的contig水平基因组组装,并确定了10个分离株的种族。这些数据可用于检验假设和系统地理分析,并为群体遗传学研究提供信息分子标记的设计。当与表型数据相结合时,它们可用于剖析基因型和表型之间的关系,如宿主范围和毒力。最后,这些基因组序列扩大了我们已知存在于这种病原体中的质粒的库存。
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