Virome assembly reveals draft genomes of native Pseudomonas phages isolated from a paediatric bronchoalveolar lavage sample.

IF 0.7 Q4 MICROBIOLOGY Microbiology Resource Announcements Pub Date : 2025-02-11 Epub Date: 2024-12-20 DOI:10.1128/mra.01030-24
Patricia Agudelo-Romero, Jose A Caparros-Martin, Abhinav Sharma, Montserrat Saladié, Peter D Sly, Stephen M Stick, Fergal O'Gara
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Abstract

We present lung virome data recovered through shotgun metagenomics in bronchoalveolar lavage fluid from an infant with cystic fibrosis, who tested positive for Stenotrophomonas maltophilia infection. Using a bioinformatic pipeline for virus characterization in shotgun metagenomic data, we identified five viral contigs representing Pseudomonas phages classified as Caudoviricetes.

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病毒组组装揭示了从儿科支气管肺泡灌洗液样本中分离出的原生假单胞菌噬菌体的基因组草案。
我们报告了通过散弹枪宏基因组学从患有囊性纤维化的婴儿的支气管肺泡灌洗液中恢复的肺病毒组数据,该婴儿被检测为嗜麦芽窄养单胞菌感染阳性。利用生物信息学管道在散弹枪宏基因组数据中进行病毒表征,我们确定了5个代表假单胞菌噬菌体的病毒组,这些病毒组被分类为尾状病毒。
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CiteScore
1.50
自引率
12.50%
发文量
837
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