Transcriptome analysis of tree peony under high temperature treatment and functional verification of PsDREB2A gene

IF 5.7 2区 生物学 Q1 PLANT SCIENCES Plant Physiology and Biochemistry Pub Date : 2025-02-01 DOI:10.1016/j.plaphy.2024.109405
Wenxuan Bu , Yu Huang , Lujie Chen , Minhuan Zhang , Xiaoning Luo , Tangchun Zheng , Fengxia Shao , Weiqun Lei , Wen Xing , Xingyu Yang , Bowen Wang , Zheng Wang
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Abstract

Paeonia suffruticosa is a plant of Paeonia in Paeoniaceae. It is an important woody ornamental flower in the world. High temperature in summer hinders the growth of tree peony and reduces its ornamental quality, which restricts the cultivation and application of tree peony in Jiangnan area of China. Paeonia suffruticosa 'Hu Hong' is a traditional Chinese tree peony variety with high ornamental value. It is an excellent parent material for cultivating heat-resistant peony. This paper selected the tree peony variety 'Hu Hong' as the material. The transcriptome data of Paeonia suffruticosa 'Hu Hong' at 0, 2, 6, 12 and 24 h after high temperature treatment were analyzed by RNA-Seq method. At each time point, a large number of significantly differentially expressed genes(DEGs) were screened between tree peony cultured at high temperature and room temperature. The analysis of the common DEGs in the four comparison groups showed that the differential genes were mainly enriched in the GO terms ' protein processing in endoplasmic reticulum', 'Pentose and glucuronate interconversions ', ' plant-pathogen interaction ', ' zeatin biosynthesis ', ' fatty acid elongation ', and ' plant hormone signal transduction ' pathways. Abscisic acid(ABA), ethylene(ET) and brassinosteroid(BR) signaling related genes were significantly up-regulated in 'Hu Hong' to resist high temperature treatment. In the auxin(IAA), cytokinin(CTK), gibberellin(GA), salicylic acid(SA) pathways, compared with the control group, the down-regulated expression was involved in hormone signal transduction to respond to high temperature treatment. A total of 62 TFs from 28 different families were annotated, with the AP2/ERF family annotating the largest number. Among the TFs annotated to the AP2/ERF family, the highest expression gene PsDREB2A was found. Overexpression of PsDREB2A Arabidopsis plants improved heat tolerance under high temperature treatment. However, silencing PsDREB2A in tree peony resulted in a heat-intolerant phenotype. PsDREB2A can directly bind to the DRE-core motif in the PsHSFA3 promoter to initiate its expression. In addition, PsHSFA3-overexpressing plants showed higher heat resistance, while PsHSFA3-silenced plants showed lower heat resistance. This study provides a scientific basis for in-depth study of the molecular mechanism of high temperature treatment response in tree peony, improving the heat signal transduction regulation network of tree peony, and mining heat-resistant related genes.
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牡丹高温处理转录组分析及PsDREB2A基因功能验证。
赤芍是芍药科芍药的一种植物。它是世界上重要的木本观赏花卉。夏季高温阻碍了牡丹的生长,降低了牡丹的观赏品质,制约了江南地区牡丹的栽培和应用。胡红牡丹是我国传统牡丹品种,具有很高的观赏价值。是培育耐热牡丹的优良亲本材料。以牡丹品种“胡红”为研究对象。采用RNA-Seq方法对高温处理后0、2、6、12和24 h的牡丹‘胡红’转录组数据进行分析。在每个时间点,从高温培养的牡丹和室温培养的牡丹中筛选出大量显著差异表达基因(DEGs)。对4个对照组的共同deg分析表明,差异基因主要富集于氧化石墨烯术语“内质网蛋白质加工”、“戊糖和葡萄糖酸盐相互转化”、“植物-病原体相互作用”、“玉米素生物合成”、“脂肪酸延伸”和“植物激素信号转导”途径。脱落酸(ABA)、乙烯(ET)和油菜素内酯(BR)信号相关基因显著上调,以抵抗高温处理。在生长素(IAA)、细胞分裂素(CTK)、赤霉素(GA)、水杨酸(SA)通路中,与对照组相比,表达下调参与了激素信号转导,以响应高温处理。共有28个不同家族的62个tf被注释,其中AP2/ERF家族的注释数量最多。在AP2/ERF家族注释的tf中,最高表达基因为PsDREB2A。过表达PsDREB2A的拟南芥植株在高温处理下提高了耐热性。然而,在牡丹中沉默PsDREB2A导致了耐热表型。PsDREB2A可直接结合PsHSFA3启动子中的re -core motif启动其表达。此外,pshsfa3过表达植株的耐热性较高,而pshsfa3沉默植株的耐热性较低。本研究为深入研究牡丹高温处理响应的分子机制,完善牡丹热信号转导调控网络,挖掘耐热相关基因提供了科学依据。
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来源期刊
Plant Physiology and Biochemistry
Plant Physiology and Biochemistry 生物-植物科学
CiteScore
11.10
自引率
3.10%
发文量
410
审稿时长
33 days
期刊介绍: Plant Physiology and Biochemistry publishes original theoretical, experimental and technical contributions in the various fields of plant physiology (biochemistry, physiology, structure, genetics, plant-microbe interactions, etc.) at diverse levels of integration (molecular, subcellular, cellular, organ, whole plant, environmental). Opinions expressed in the journal are the sole responsibility of the authors and publication does not imply the editors'' agreement. Manuscripts describing molecular-genetic and/or gene expression data that are not integrated with biochemical analysis and/or actual measurements of plant physiological processes are not suitable for PPB. Also "Omics" studies (transcriptomics, proteomics, metabolomics, etc.) reporting descriptive analysis without an element of functional validation assays, will not be considered. Similarly, applied agronomic or phytochemical studies that generate no new, fundamental insights in plant physiological and/or biochemical processes are not suitable for publication in PPB. Plant Physiology and Biochemistry publishes several types of articles: Reviews, Papers and Short Papers. Articles for Reviews are either invited by the editor or proposed by the authors for the editor''s prior agreement. Reviews should not exceed 40 typewritten pages and Short Papers no more than approximately 8 typewritten pages. The fundamental character of Plant Physiology and Biochemistry remains that of a journal for original results.
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