Pan-cancer analysis reveals age-associated genetic alterations in protein domains.

IF 8.1 1区 生物学 Q1 GENETICS & HEREDITY American journal of human genetics Pub Date : 2025-01-02 Epub Date: 2024-12-20 DOI:10.1016/j.ajhg.2024.11.011
Haozhe Zou, Si Li, Jiyu Guo, Luan Wen, Chongwen Lv, Feng Leng, Zefeng Chen, Mengqian Zeng, Juan Xu, Yongsheng Li, Xia Li
{"title":"Pan-cancer analysis reveals age-associated genetic alterations in protein domains.","authors":"Haozhe Zou, Si Li, Jiyu Guo, Luan Wen, Chongwen Lv, Feng Leng, Zefeng Chen, Mengqian Zeng, Juan Xu, Yongsheng Li, Xia Li","doi":"10.1016/j.ajhg.2024.11.011","DOIUrl":null,"url":null,"abstract":"<p><p>Cancer incidence and mortality differ among individuals of different ages, but the functional consequences of genetic alterations remain largely unknown. We systematically characterized genetic alterations within protein domains stratified by affected individual's age and showed that the mutational effects on domains varied with age. We further identified potential age-associated driver genes with hotspots across 33 cancers. The candidate drivers involved numerous cancer-related genes that participate in various oncogenic pathways and play central roles in human protein-protein interaction (PPI) networks. We found widespread age biases in protein domains and identified the associations between hotspots and age. Age-stratified PPI networks perturbed by hotspots were constructed to illustrate the function of mutations enriched in domains. We found that hotspots in young adults were associated with premature senescence. In summary, we provided a catalog of age-associated hotspots and their perturbed networks, which may facilitate precision diagnostics and treatments for cancer.</p>","PeriodicalId":7659,"journal":{"name":"American journal of human genetics","volume":" ","pages":"44-58"},"PeriodicalIF":8.1000,"publicationDate":"2025-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11739924/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"American journal of human genetics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1016/j.ajhg.2024.11.011","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/12/20 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

Cancer incidence and mortality differ among individuals of different ages, but the functional consequences of genetic alterations remain largely unknown. We systematically characterized genetic alterations within protein domains stratified by affected individual's age and showed that the mutational effects on domains varied with age. We further identified potential age-associated driver genes with hotspots across 33 cancers. The candidate drivers involved numerous cancer-related genes that participate in various oncogenic pathways and play central roles in human protein-protein interaction (PPI) networks. We found widespread age biases in protein domains and identified the associations between hotspots and age. Age-stratified PPI networks perturbed by hotspots were constructed to illustrate the function of mutations enriched in domains. We found that hotspots in young adults were associated with premature senescence. In summary, we provided a catalog of age-associated hotspots and their perturbed networks, which may facilitate precision diagnostics and treatments for cancer.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
泛癌分析揭示了与年龄相关的蛋白质结构域的遗传改变。
癌症发病率和死亡率在不同年龄的个体之间存在差异,但基因改变的功能后果在很大程度上仍然未知。我们系统地描述了受影响个体年龄分层的蛋白质结构域内的遗传改变,并表明结构域的突变效应随年龄而变化。我们进一步确定了33种癌症中与年龄相关的潜在驱动基因热点。候选驱动因素涉及许多癌症相关基因,这些基因参与各种致癌途径,并在人类蛋白质-蛋白质相互作用(PPI)网络中发挥核心作用。我们发现蛋白质结构域普遍存在年龄偏差,并确定了热点与年龄之间的关联。构建了受热点干扰的年龄分层PPI网络,以说明结构域富集突变的功能。我们发现,年轻人的热点与过早衰老有关。总之,我们提供了一个与年龄相关的热点及其扰动网络的目录,这可能有助于癌症的精确诊断和治疗。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
CiteScore
14.70
自引率
4.10%
发文量
185
审稿时长
1 months
期刊介绍: The American Journal of Human Genetics (AJHG) is a monthly journal published by Cell Press, chosen by The American Society of Human Genetics (ASHG) as its premier publication starting from January 2008. AJHG represents Cell Press's first society-owned journal, and both ASHG and Cell Press anticipate significant synergies between AJHG content and that of other Cell Press titles.
期刊最新文献
Single-cell transcriptomics reveals inter-ethnic variation in immune response to Falciparum malaria. Contribution of autosomal rare and de novo variants to sex differences in autism. Distinct explanations underlie gene-environment interactions in the UK Biobank. An evolving understanding of multiple causal variants underlying genetic association signals. Isogenic hiPSC models of Turner syndrome development reveal shared roles of inactive X and Y in the human cranial neural crest network.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1