Unsupervised tooth segmentation from three dimensional scans of the dental arch using domain adaptation of synthetic data

IF 3.7 2区 医学 Q2 COMPUTER SCIENCE, INFORMATION SYSTEMS International Journal of Medical Informatics Pub Date : 2024-12-19 DOI:10.1016/j.ijmedinf.2024.105769
Md Sahadul Hasan Arian , Faisal Ahmed Sifat , Saif Ahmed , Nabeel Mohammed , Taseef Hasan Farook
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Abstract

Background

The automated segmentation of individual teeth from 3D models of the human dental arch is challenging due to variations in tooth alignment, arch form and overall maxillofacial anatomy. Domain adaptation is a specialised technique in deep learning which allows models to adapt to data from different domains, such as varying tooth and dental arch forms, without requiring human annotations.

Purpose

This study aimed to segment individual teeth from various dental arch morphologies in 3D intraoral scans using domain adaptation.

Materials and Methods

Twenty scanned dental arches from various age groups and developmental stages were used to generate 20 simplified synthetic variants of the scans. These synthetic variants, along with 16 natural scanned dental arches, were used to train the deep learning models. Domain adaptation was employed using Gradient Reversal Layer and Siamese Network techniques. The PointNet and PointNet++ model backbones were trained to align the latent space distribution of real and synthetic domains. Validations were performed on four unseen natural scanned arches, with and without domain adaptation enabled, to evaluate whether a 3D deep neural network can be trained without any human-annotated 3D models.

Results

PointNet and PointNet++ models demonstrated a mean intersection-over-union between 0.34 and 0.36 mIoU without domain adaptation enabled and 0.80 and 0.95 mIoU, respectively with domain adaptation enabled when assessing natural scanned dental arches.

Conclusion

Domain adaptation techniques can enable training a segmentation deep learning model using synthetically generated 3D jaw scans without requiring human operators annotating the training data.

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基于合成数据域自适应的牙弓三维扫描无监督牙齿分割。
背景:由于牙齿排列、牙弓形状和整体颌面解剖结构的变化,从人类牙弓三维模型中自动分割单个牙齿是具有挑战性的。领域适应是深度学习中的一种专门技术,它允许模型适应来自不同领域的数据,例如不同的牙齿和牙弓形式,而不需要人工注释。目的:本研究旨在利用区域适应技术在三维口腔内扫描中对不同牙弓形态的单个牙齿进行分割。材料和方法:使用20个不同年龄组和发育阶段的扫描牙弓生成20个简化的合成扫描变体。这些合成变体,以及16个自然扫描的牙弓,被用来训练深度学习模型。采用梯度反转层和暹罗网络技术进行领域自适应。训练PointNet和PointNet++模型主干,对准实域和合成域的潜在空间分布。在四个看不见的自然扫描拱门上进行验证,启用和不启用域适应,以评估3D深度神经网络是否可以在没有任何人类注释的3D模型的情况下进行训练。结果:在评估自然扫描牙弓时,PointNet和PointNet++模型在未启用域自适应和启用域自适应情况下的平均交叉超结合度分别为0.34和0.36 mIoU和0.80和0.95 mIoU。结论:领域自适应技术可以在不需要人工操作员注释训练数据的情况下,使用合成的3D颌骨扫描来训练分割深度学习模型。
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来源期刊
International Journal of Medical Informatics
International Journal of Medical Informatics 医学-计算机:信息系统
CiteScore
8.90
自引率
4.10%
发文量
217
审稿时长
42 days
期刊介绍: International Journal of Medical Informatics provides an international medium for dissemination of original results and interpretative reviews concerning the field of medical informatics. The Journal emphasizes the evaluation of systems in healthcare settings. The scope of journal covers: Information systems, including national or international registration systems, hospital information systems, departmental and/or physician''s office systems, document handling systems, electronic medical record systems, standardization, systems integration etc.; Computer-aided medical decision support systems using heuristic, algorithmic and/or statistical methods as exemplified in decision theory, protocol development, artificial intelligence, etc. Educational computer based programs pertaining to medical informatics or medicine in general; Organizational, economic, social, clinical impact, ethical and cost-benefit aspects of IT applications in health care.
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