ANI-1ccx-gelu Universal Interatomic Potential and Its Fine-Tuning: Toward Accurate and Efficient Anharmonic Vibrational Frequencies

IF 4.6 2区 化学 Q2 CHEMISTRY, PHYSICAL The Journal of Physical Chemistry Letters Pub Date : 2025-01-02 DOI:10.1021/acs.jpclett.4c03031
Seyedeh Fatemeh Alavi, Yuxinxin Chen, Yi-Fan Hou, Fuchun Ge, Peikun Zheng, Pavlo O. Dral
{"title":"ANI-1ccx-gelu Universal Interatomic Potential and Its Fine-Tuning: Toward Accurate and Efficient Anharmonic Vibrational Frequencies","authors":"Seyedeh Fatemeh Alavi, Yuxinxin Chen, Yi-Fan Hou, Fuchun Ge, Peikun Zheng, Pavlo O. Dral","doi":"10.1021/acs.jpclett.4c03031","DOIUrl":null,"url":null,"abstract":"Calculating anharmonic vibrational modes of molecules for interpreting experimental spectra is one of the most interesting challenges of contemporary computational chemistry. However, the traditional QM methods are costly for this application. Machine learning techniques have emerged as a powerful tool for substituting the traditional QM methods. Universal interatomic potentials (UIPs) hold a particular promise to deliver accurate results at a fraction of the cost of the traditional QM methods, but the performance of UIPs for calculating anharmonic vibrational frequencies remains hitherto unknown. Here we show that despite a known excellent performance of the representative UIP ANI-1ccx for thermochemical properties, it fails for the anharmonic frequencies due to the original unfortunate choice of the activation function. Hence, we recommend evaluating new UIPs on anharmonic frequencies as an additional important quality test. To remedy the shortcomings of ANI-1ccx, we introduce its reformulation ANI-1ccx-gelu with the GELU activation function, which is capable of calculating IR anharmonic frequencies with reasonable accuracy (close to B3LYP/6-31G*). We also show that our new UIP can be fine-tuned to obtain very accurate anharmonic frequencies for some specific molecules but more effort is needed to improve the overall quality of UIP and its capability for fine-tuning. The new UIP will be included as part of our universal and updatable AI-enhanced QM methods (UAIQM) platform and is available together with usage and fine-tuning tutorials in open-source MLatom at https://github.com/dralgroup/mlatom. The calculations can also be performed via a web browser at https://XACScloud.com.","PeriodicalId":62,"journal":{"name":"The Journal of Physical Chemistry Letters","volume":"92 1","pages":""},"PeriodicalIF":4.6000,"publicationDate":"2025-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Journal of Physical Chemistry Letters","FirstCategoryId":"1","ListUrlMain":"https://doi.org/10.1021/acs.jpclett.4c03031","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0

Abstract

Calculating anharmonic vibrational modes of molecules for interpreting experimental spectra is one of the most interesting challenges of contemporary computational chemistry. However, the traditional QM methods are costly for this application. Machine learning techniques have emerged as a powerful tool for substituting the traditional QM methods. Universal interatomic potentials (UIPs) hold a particular promise to deliver accurate results at a fraction of the cost of the traditional QM methods, but the performance of UIPs for calculating anharmonic vibrational frequencies remains hitherto unknown. Here we show that despite a known excellent performance of the representative UIP ANI-1ccx for thermochemical properties, it fails for the anharmonic frequencies due to the original unfortunate choice of the activation function. Hence, we recommend evaluating new UIPs on anharmonic frequencies as an additional important quality test. To remedy the shortcomings of ANI-1ccx, we introduce its reformulation ANI-1ccx-gelu with the GELU activation function, which is capable of calculating IR anharmonic frequencies with reasonable accuracy (close to B3LYP/6-31G*). We also show that our new UIP can be fine-tuned to obtain very accurate anharmonic frequencies for some specific molecules but more effort is needed to improve the overall quality of UIP and its capability for fine-tuning. The new UIP will be included as part of our universal and updatable AI-enhanced QM methods (UAIQM) platform and is available together with usage and fine-tuning tutorials in open-source MLatom at https://github.com/dralgroup/mlatom. The calculations can also be performed via a web browser at https://XACScloud.com.

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
ANI-1ccx-gelu通用原子间势及其微调:向精确和有效的非谐波振动频率发展
计算分子的非调和振动模式以解释实验光谱是当代计算化学中最有趣的挑战之一。然而,对于这个应用程序,传统的QM方法是昂贵的。机器学习技术已经成为取代传统质量管理方法的有力工具。普遍原子相互作用势(Universal interatomic potentials, uip)有望以传统量子力学方法的一小部分成本提供准确的结果,但迄今为止,普遍原子相互作用势在计算非谐波振动频率方面的性能仍然未知。在这里,我们表明,尽管已知具有代表性的UIP ANI-1ccx在热化学性质方面具有优异的性能,但由于原始激活函数的不幸选择,它在非谐波频率方面失败。因此,我们建议在非谐波频率上评估新的ups,作为一项额外的重要质量测试。为了弥补ANI-1ccx的不足,我们引入了带有GELU激活函数的ANI-1ccx- GELU,该函数能够以合理的精度(接近B3LYP/6-31G*)计算红外非谐波频率。我们还表明,我们的新UIP可以微调以获得一些特定分子的非常精确的非谐波频率,但需要更多的努力来提高UIP的整体质量及其微调能力。新的UIP将作为我们通用的和可更新的ai增强QM方法(UAIQM)平台的一部分,并与使用和微调教程一起在开源MLatom上提供,网址为https://github.com/dralgroup/mlatom。计算也可以通过web浏览器在https://XACScloud.com上执行。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
The Journal of Physical Chemistry Letters
The Journal of Physical Chemistry Letters CHEMISTRY, PHYSICAL-NANOSCIENCE & NANOTECHNOLOGY
CiteScore
9.60
自引率
7.00%
发文量
1519
审稿时长
1.6 months
期刊介绍: The Journal of Physical Chemistry (JPC) Letters is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, chemical physicists, physicists, material scientists, and engineers. An important criterion for acceptance is that the paper reports a significant scientific advance and/or physical insight such that rapid publication is essential. Two issues of JPC Letters are published each month.
期刊最新文献
Similar Prenucleation Clusters in Hot-Injection and Heating-Up Approaches to CdS Colloidal Semiconductor Quantum Dots. Plasmonic Au-Assisted g-C3N4/CeO2 Heterojunction for Enhanced Photocatalytic Breakdown of Organic Pollutants. Vibrational Energy Transfer in Organic Semiconductors Revealed by Infrared Pump–Probe Spectroscopy Coupled Orientational Disorder and Hydrogen-Bond Destabilization Drive Anisotropic Surface Melting in Curcumin Polymorphs. Issue Editorial Masthead
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1