Inspect quantitative signals in placental histopathology: Computer-assisted multiple functional tissues identification through multi-model fusion and distillation framework

IF 5.4 2区 医学 Q1 ENGINEERING, BIOMEDICAL Computerized Medical Imaging and Graphics Pub Date : 2025-01-01 DOI:10.1016/j.compmedimag.2024.102482
Yiming Liu , Ling Zhang , Mingxue Gu , Yaoxing Xiao , Ting Yu , Xiang Tao , Qing Zhang , Yan Wang , Dinggang Shen , Qingli Li
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Abstract

Pathological analysis of placenta is currently a valuable tool for gaining insights into pregnancy outcomes. In placental histopathology, multiple functional tissues can be inspected as potential signals reflecting the transfer functionality between fetal and maternal circulations. However, the identification of multiple functional tissues is challenging due to (1) severe heterogeneity in texture, size and shape, (2) distribution across different scales and (3) the need for comprehensive assessment at the whole slide image (WSI) level. To solve aforementioned problems, we establish a brand new dataset and propose a computer-aided segmentation framework through multi-model fusion and distillation to identify multiple functional tissues in placental histopathologic images, including villi, capillaries, fibrin deposits and trophoblast aggregations. Specifically, we propose a two-stage Multi-model Fusion and Distillation (MMFD) framework. Considering the multi-scale distribution and heterogeneity of multiple functional tissues, we enhance the visual representation in the first stage by fusing feature from multiple models to boost the effectiveness of the network. However, the multi-model fusion stage contributes to extra parameters and a significant computational burden, which is impractical for recognizing gigapixels of WSIs within clinical practice. In the second stage, we propose straightforward plug-in feature distillation method that transfers knowledge from the large fused model to a compact student model. In self-collected placental dataset, our proposed MMFD framework demonstrates an improvement of 4.3% in mean Intersection over Union (mIoU) while achieving an approximate 50% increase in inference speed and utilizing only 10% of parameters and computational resources, compared to the parameter-efficient fine-tuned Segment Anything Model (SAM) baseline. Visualization of segmentation results across entire WSIs on unseen cases demonstrates the generalizability of our proposed MMFD framework. Besides, experimental results on a public dataset further prove the effectiveness of MMFD framework on other tasks. Our work can present a fundamental method to expedite quantitative analysis of placental histopathology.
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检测胎盘组织病理学中的定量信号:通过多模型融合和蒸馏框架进行计算机辅助的多功能组织识别。
目前,胎盘病理分析是了解妊娠结局的一种有价值的工具。在胎盘组织病理学中,可以检查多个功能组织作为反映胎儿和母体循环之间转移功能的潜在信号。然而,由于(1)纹理、大小和形状的严重异质性,(2)不同尺度的分布,(3)需要在整个幻灯片图像(WSI)水平上进行综合评估,对多种功能组织的识别具有挑战性。为了解决上述问题,我们建立了一个全新的数据集,并通过多模型融合和精馏提出了一个计算机辅助分割框架,以识别胎盘组织病理图像中的多种功能组织,包括绒毛、毛细血管、纤维蛋白沉积和滋养细胞聚集。具体来说,我们提出了一个两阶段的多模型融合和蒸馏(MMFD)框架。考虑到多个功能组织的多尺度分布和异质性,我们在第一阶段通过融合多个模型的特征来增强视觉表征,以提高网络的有效性。然而,多模型融合阶段会带来额外的参数和巨大的计算负担,这对于临床实践中识别千兆像素的wsi是不切实际的。在第二阶段,我们提出了直接的插件特征蒸馏方法,将知识从大型融合模型转移到紧凑的学生模型。在自我收集的胎盘数据集中,与参数高效的微调分段任意模型(SAM)基线相比,我们提出的MMFD框架在平均交叉交叉(mIoU)上提高了4.3%,同时在推理速度上提高了约50%,仅利用了10%的参数和计算资源。对未见案例的整个wsi分割结果的可视化证明了我们提出的MMFD框架的通用性。此外,在公共数据集上的实验结果进一步证明了MMFD框架在其他任务上的有效性。我们的工作为加快胎盘组织病理学定量分析提供了一种基本方法。
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来源期刊
CiteScore
10.70
自引率
3.50%
发文量
71
审稿时长
26 days
期刊介绍: The purpose of the journal Computerized Medical Imaging and Graphics is to act as a source for the exchange of research results concerning algorithmic advances, development, and application of digital imaging in disease detection, diagnosis, intervention, prevention, precision medicine, and population health. Included in the journal will be articles on novel computerized imaging or visualization techniques, including artificial intelligence and machine learning, augmented reality for surgical planning and guidance, big biomedical data visualization, computer-aided diagnosis, computerized-robotic surgery, image-guided therapy, imaging scanning and reconstruction, mobile and tele-imaging, radiomics, and imaging integration and modeling with other information relevant to digital health. The types of biomedical imaging include: magnetic resonance, computed tomography, ultrasound, nuclear medicine, X-ray, microwave, optical and multi-photon microscopy, video and sensory imaging, and the convergence of biomedical images with other non-imaging datasets.
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