Assembly and analysis of the first complete mitochondrial genome sequencing of main Tea-oil Camellia cultivars Camellia drupifera (Theaceae): revealed a multi-branch mitochondrial conformation for Camellia.

IF 4.8 2区 生物学 Q1 PLANT SCIENCES BMC Plant Biology Pub Date : 2025-01-03 DOI:10.1186/s12870-024-05996-4
Heng Liang, Huasha Qi, Jiali Chen, Yidan Wang, Moyang Liu, Xiuxiu Sun, Chunmei Wang, Tengfei Xia, Xuejie Feng, Shiling Feng, Cheng Chen, Daojun Zheng
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Abstract

Background: Tea-oil Camellia within the genus Camellia is renowned for its premium Camellia oil, often described as "Oriental olive oil". So far, only one partial mitochondrial genomes of Tea-oil Camellia have been published (no main Tea-oil Camellia cultivars), and comparative mitochondrial genomic studies of Camellia remain limited.

Results: In this study, we first reconstructed the entire mitochondrial genome of C. drupifera to gain insights into its genetic structure and evolutionary history. Through our analysis, we observed a characteristic multi-branched configuration in the mitochondrial genomes of C. drupifera. A thorough examination of the protein-coding regions (PCGs) across Camellia species identified gene losses that occurred during their evolution. Notably, repeat sequences showed a weak correlation between the abundance of simple sequence repeats (SSRs) and genome size of Camellia. Additionally, despite of the considerable variations in the sizes of Camellia mitochondrial genomes, there was little diversity in GC content and gene composition. The phylogenetic tree derived from mitochondrial data was inconsistent with that generated from chloroplast data.

Conclusions: In conclusion, our study provides valuable insights into the molecular characteristics and evolutionary mechanisms of multi-branch mitochondrial structures in Camellia. The high-resolution mitogenome of C. drupifera enhances our understanding of multi-branch mitogenomes and lays a solid groundwork for future advancements in genomic improvement and germplasm innovation within Tea-oil Camellia.

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主要油茶品种油茶(Camellia drupifera,山茶科)首次线粒体全基因组测序的组装与分析:揭示了油茶的多分支线粒体构象。
茶花属的茶花以其优质的茶花油而闻名,通常被称为“东方橄榄油”。迄今为止,只发表了一个茶油茶花线粒体部分基因组(没有主要茶油茶花品种),对茶油茶花线粒体基因组的比较研究仍然有限。结果:在本研究中,我们首先重建了C. drupifera的整个线粒体基因组,以了解其遗传结构和进化史。通过我们的分析,我们观察到C. drupifera线粒体基因组具有典型的多分支结构。对茶花物种的蛋白质编码区(PCGs)进行了彻底的检查,发现了它们在进化过程中发生的基因损失。值得注意的是,重复序列显示,简单重复序列(SSRs)的丰度与山茶的基因组大小呈弱相关。此外,尽管山茶花线粒体基因组的大小存在很大差异,但GC含量和基因组成的多样性很小。从线粒体数据得到的系统发育树与从叶绿体数据得到的系统发育树不一致。结论:本研究为茶花多分支线粒体结构的分子特征及其进化机制提供了有价值的认识。高分辨率的油茶有丝分裂基因组的研究,为油茶基因组改良和种质创新奠定了坚实的基础。
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来源期刊
BMC Plant Biology
BMC Plant Biology 生物-植物科学
CiteScore
8.40
自引率
3.80%
发文量
539
审稿时长
3.8 months
期刊介绍: BMC Plant Biology is an open access, peer-reviewed journal that considers articles on all aspects of plant biology, including molecular, cellular, tissue, organ and whole organism research.
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