首页 > 最新文献

BMC Plant Biology最新文献

英文 中文
Identification of candidate genes associated with regreening stage in rapeseed (Brassica Rapa L.) by combined application of BSA-Seq and RNA-Seq. BSA-Seq和RNA-Seq联合应用于油菜绿期相关候选基因的鉴定
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-10 DOI: 10.1186/s12870-026-08345-9
Mingwei Guan, Anqiang Guo, Heping Li, Lanju Zhai, Jiming Li, Aiguo Li

Background: The regreening stage (RS) is a critical agronomic trait impacting yield potential in rapeseed (Brassica rapa L.), yet its underlying genetic mechanisms remain largely unexplored. Field observations indicate that early-regreening cultivars, like 'Hengyou 8', exhibit a longer grain-filling period and higher thousand-seed weight (TSW) compared to late-regreening cultivars like 'Hengyou 6'. This study aimed to systematically dissect the genetic basis of RS initiation to identify key regulatory genes and provide resources for molecular breeding.

Results: We constructed an F₂ population from a cross between 'Hengyou 8' and 'Hengyou 6' and employed Bulk Segregant Analysis sequencing (BSA-seq), which identified 11 quantitative trait loci (QTLs) associated with RS on chromosomes A01, A02, A04, A05, A06, A08, A09, and A10. Concurrently, transcriptome sequencing (RNA-seq) of shoot apical meristems and roots across the RS process revealed 17,242 differentially expressed genes (DEGs). Integrated analysis of BSA-seq and RNA-seq data pinpointed 15 high-confidence candidate genes within the QTL regions. These include NAC016, NAC017, MYC2, and DDE2, which are primarily involved in jasmonic acid (JA) metabolism, phytohormone signaling, cell development, and stress responses. Expression profiling showed distinct spatiotemporal patterns for these genes between the parental lines, suggesting their roles in modulating the timing of regreening.

Conclusions: Our findings provide the first comprehensive genetic map of the regreening process in rapeseed, revealing a dynamic regulatory network centered on JA signaling and stress response pathways. The identified candidate genes and associated molecular markers establish a valuable resource and a solid theoretical foundation for future functional studies. More importantly, we have identified direct targets for marker-assisted selection (MAS). This provides a foundation for breeding novel rapeseed cultivars with optimized regreening timing and enhanced yield potential.

背景:绿期(RS)是影响油菜产量潜力的重要农艺性状,但其潜在的遗传机制尚不清楚。田间观察表明,早绿品种‘恒优8号’灌浆期较晚绿品种‘恒优6号’更长,千粒重更高。本研究旨在系统剖析RS起始的遗传基础,鉴定关键调控基因,为分子育种提供资源。结果:以‘恒优8号’和‘恒优6号’为材料构建F₂群体,采用BSA-seq测序技术,在A01、A02、A04、A05、A06、A08、A09和A10染色体上鉴定出11个与RS相关的数量性状位点。同时,对茎尖分生组织和根系进行转录组测序(RNA-seq),发现17242个差异表达基因(DEGs)。BSA-seq和RNA-seq数据的综合分析在QTL区域内确定了15个高置信度的候选基因。其中包括NAC016、NAC017、MYC2和DDE2,它们主要参与茉莉酸(JA)代谢、植物激素信号传导、细胞发育和应激反应。这些基因在亲本系之间的表达谱显示出不同的时空模式,表明它们在调节变绿时间方面的作用。结论:我们的研究结果首次提供了油菜籽重绿过程的全面遗传图谱,揭示了一个以JA信号和胁迫反应途径为中心的动态调控网络。所鉴定的候选基因和相关分子标记为今后的功能研究提供了宝贵的资源和坚实的理论基础。更重要的是,我们已经确定了标记辅助选择(MAS)的直接靶点。这为选育适宜复绿时间和提高产量潜力的油菜籽新品种奠定了基础。
{"title":"Identification of candidate genes associated with regreening stage in rapeseed (Brassica Rapa L.) by combined application of BSA-Seq and RNA-Seq.","authors":"Mingwei Guan, Anqiang Guo, Heping Li, Lanju Zhai, Jiming Li, Aiguo Li","doi":"10.1186/s12870-026-08345-9","DOIUrl":"https://doi.org/10.1186/s12870-026-08345-9","url":null,"abstract":"<p><strong>Background: </strong>The regreening stage (RS) is a critical agronomic trait impacting yield potential in rapeseed (Brassica rapa L.), yet its underlying genetic mechanisms remain largely unexplored. Field observations indicate that early-regreening cultivars, like 'Hengyou 8', exhibit a longer grain-filling period and higher thousand-seed weight (TSW) compared to late-regreening cultivars like 'Hengyou 6'. This study aimed to systematically dissect the genetic basis of RS initiation to identify key regulatory genes and provide resources for molecular breeding.</p><p><strong>Results: </strong>We constructed an F₂ population from a cross between 'Hengyou 8' and 'Hengyou 6' and employed Bulk Segregant Analysis sequencing (BSA-seq), which identified 11 quantitative trait loci (QTLs) associated with RS on chromosomes A01, A02, A04, A05, A06, A08, A09, and A10. Concurrently, transcriptome sequencing (RNA-seq) of shoot apical meristems and roots across the RS process revealed 17,242 differentially expressed genes (DEGs). Integrated analysis of BSA-seq and RNA-seq data pinpointed 15 high-confidence candidate genes within the QTL regions. These include NAC016, NAC017, MYC2, and DDE2, which are primarily involved in jasmonic acid (JA) metabolism, phytohormone signaling, cell development, and stress responses. Expression profiling showed distinct spatiotemporal patterns for these genes between the parental lines, suggesting their roles in modulating the timing of regreening.</p><p><strong>Conclusions: </strong>Our findings provide the first comprehensive genetic map of the regreening process in rapeseed, revealing a dynamic regulatory network centered on JA signaling and stress response pathways. The identified candidate genes and associated molecular markers establish a valuable resource and a solid theoretical foundation for future functional studies. More importantly, we have identified direct targets for marker-assisted selection (MAS). This provides a foundation for breeding novel rapeseed cultivars with optimized regreening timing and enhanced yield potential.</p>","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146149134","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Seed endophytic bacteria are involved in metal adaptation of Orobanche lutea: community dynamics and plant growth promotion traits. 种子内生细菌参与了黄花苜蓿的金属适应:群落动态和植物生长促进性状。
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-10 DOI: 10.1186/s12870-026-08304-4
Kristine Petrosyan, Sofie Thijs, Tomasz Krucon, Renata Piwowarczyk, Karolina Wiśniewska, Wiesław Kaca, Jaco Vangronsveld
{"title":"Seed endophytic bacteria are involved in metal adaptation of Orobanche lutea: community dynamics and plant growth promotion traits.","authors":"Kristine Petrosyan, Sofie Thijs, Tomasz Krucon, Renata Piwowarczyk, Karolina Wiśniewska, Wiesław Kaca, Jaco Vangronsveld","doi":"10.1186/s12870-026-08304-4","DOIUrl":"https://doi.org/10.1186/s12870-026-08304-4","url":null,"abstract":"","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146149147","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Impact of altitudinal variation on nutrient dynamics, and bioactive composition of hazelnut (Corylus avellana L.) kernel. 海拔变化对榛子仁营养动态及生物活性成分的影响
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-10 DOI: 10.1186/s12870-026-08302-6
Yakup Polat, Muhammet Ali Gündeşli, Murat Güney, Muttalip Gundogdu, Nesibe Ebru Kafkas
{"title":"Impact of altitudinal variation on nutrient dynamics, and bioactive composition of hazelnut (Corylus avellana L.) kernel.","authors":"Yakup Polat, Muhammet Ali Gündeşli, Murat Güney, Muttalip Gundogdu, Nesibe Ebru Kafkas","doi":"10.1186/s12870-026-08302-6","DOIUrl":"https://doi.org/10.1186/s12870-026-08302-6","url":null,"abstract":"","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146149101","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Response of sorghum (Sorghum bicolor (L.) Moench) to various-duration of drought: physiology, transcriptome, and weighted gene co-expression network analysis. 高粱(sorghum bicolor (L.))的响应Moench)对不同持续时间干旱的影响:生理学,转录组学和加权基因共表达网络分析。
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-10 DOI: 10.1186/s12870-026-08297-0
Qian Ma, Rui Wang, Fang He, Wei Wan, Xiaojuan Liu, Jieqiong Zhang, Kuiyin Li, Mingjian Ren
{"title":"Response of sorghum (Sorghum bicolor (L.) Moench) to various-duration of drought: physiology, transcriptome, and weighted gene co-expression network analysis.","authors":"Qian Ma, Rui Wang, Fang He, Wei Wan, Xiaojuan Liu, Jieqiong Zhang, Kuiyin Li, Mingjian Ren","doi":"10.1186/s12870-026-08297-0","DOIUrl":"https://doi.org/10.1186/s12870-026-08297-0","url":null,"abstract":"","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146149161","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A PCA-random forest pipeline for high-resolution SNP-based cultivar discrimination in Leymus chinensis. 基于高分辨率snp的羊草品种鉴别pca -随机森林管道
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-09 DOI: 10.1186/s12870-026-08282-7
Chuifan Kong, Shuyi Hu, Lei Tian, Shuangyan Chen
{"title":"A PCA-random forest pipeline for high-resolution SNP-based cultivar discrimination in Leymus chinensis.","authors":"Chuifan Kong, Shuyi Hu, Lei Tian, Shuangyan Chen","doi":"10.1186/s12870-026-08282-7","DOIUrl":"https://doi.org/10.1186/s12870-026-08282-7","url":null,"abstract":"","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146149096","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Integrative WGCNA analysis uncovers the molecular framework of melatonin-mediated drought stress mitigation in potato. 综合WGCNA分析揭示了褪黑激素介导的马铃薯干旱胁迫缓解的分子框架。
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-09 DOI: 10.1186/s12870-026-08315-1
Songtao Liu, Yan Wang, Xinwei Wang, Xiaonuo Zhang, Yanmin Li, Yangjie Chen, Jie Yang, Lu Liu, Xiaoting Zhai

Drought is one of the major abiotic stress factors limiting the growth, development, and yield of potato (Solanum tuberosum L.). Melatonin, a novel plant hormone, has recently shown significant potential in enhancing plant stress resistance. However, its regulatory mechanisms in response to drought stress in potato remain unclear. In this study, potato seedlings were treated with different concentrations of exogenous melatonin (50, 100, and 150 µmol L⁻¹) under controlled drought conditions to systematically evaluate their physiological and molecular responses. The results demonstrated that appropriate melatonin application, especially at 100 µmol L⁻¹ effectively alleviated drought-induced growth inhibition, oxidative stress, and photosynthetic impairment. This was evidenced by increased plant height, enhanced photosynthetic efficiency, reduced reactive oxygen species (ROS) accumulation, decreased cell death and lipid peroxidation, as well as elevated antioxidant enzyme activities (superoxide dismutase - SOD, catalase - CAT, peroxidase - POD) and levels of osmoprotectants (proline - Pro and soluble sugars - SS). Transcriptome analysis revealed that melatonin modulates numerous drought-responsive differentially expressed genes (DEGs), including multiple transcription factor (TF) families (e.g., MYB, NAC, ERF), and pathways related to photosynthesis, antioxidative metabolism, hormone signaling, and carbon metabolism. Furthermore, weighted gene co-expression network analysis (WGCNA) and Mfuzz clustering identified key gene modules and central hub genes strongly associated with photosynthetic performance and antioxidant indicators. Overexpression of StMYB and StAPX in Arabidopsis significantly enhanced drought tolerance by improving antioxidant enzyme activities and maintaining membrane stability under water-deficit conditions. This study provides a theoretical foundation for applying melatonin in potato drought stress mitigation and lays a molecular basis for developing melatonin-based agronomic strategies for improving drought tolerance.

干旱是制约马铃薯生长发育和产量的主要非生物胁迫因子之一。褪黑素是一种新的植物激素,近年来在增强植物抗逆性方面显示出巨大的潜力。然而,其对马铃薯干旱胁迫的调控机制尚不清楚。在这项研究中,马铃薯幼苗用不同浓度的外源褪黑素(50、100和150µmol L - 1)在干旱条件下处理,以系统地评估它们的生理和分子反应。结果表明,适当的褪黑素,特别是100µmol L的褪黑素可以有效地缓解干旱引起的生长抑制、氧化应激和光合作用障碍。这可以通过提高植株高度、提高光合效率、减少活性氧(ROS)积累、减少细胞死亡和脂质过氧化、提高抗氧化酶活性(超氧化物歧化酶- SOD、过氧化氢酶- CAT、过氧化物酶- POD)和渗透保护剂(脯氨酸- Pro和可溶性糖- SS)水平来证明。转录组分析显示,褪黑激素调节多种干旱响应差异表达基因(DEGs),包括多个转录因子(TF)家族(如MYB、NAC、ERF),以及与光合作用、抗氧化代谢、激素信号和碳代谢相关的途径。此外,加权基因共表达网络分析(WGCNA)和Mfuzz聚类鉴定出与光合性能和抗氧化指标密切相关的关键基因模块和中心枢纽基因。StMYB和StAPX在拟南芥中过表达,通过提高抗氧化酶活性和维持缺水条件下膜的稳定性,显著增强了拟南芥的抗旱性。本研究为褪黑素在马铃薯抗旱胁迫中的应用提供了理论基础,并为开发基于褪黑素的抗旱农艺策略奠定了分子基础。
{"title":"Integrative WGCNA analysis uncovers the molecular framework of melatonin-mediated drought stress mitigation in potato.","authors":"Songtao Liu, Yan Wang, Xinwei Wang, Xiaonuo Zhang, Yanmin Li, Yangjie Chen, Jie Yang, Lu Liu, Xiaoting Zhai","doi":"10.1186/s12870-026-08315-1","DOIUrl":"https://doi.org/10.1186/s12870-026-08315-1","url":null,"abstract":"<p><p>Drought is one of the major abiotic stress factors limiting the growth, development, and yield of potato (Solanum tuberosum L.). Melatonin, a novel plant hormone, has recently shown significant potential in enhancing plant stress resistance. However, its regulatory mechanisms in response to drought stress in potato remain unclear. In this study, potato seedlings were treated with different concentrations of exogenous melatonin (50, 100, and 150 µmol L⁻¹) under controlled drought conditions to systematically evaluate their physiological and molecular responses. The results demonstrated that appropriate melatonin application, especially at 100 µmol L⁻¹ effectively alleviated drought-induced growth inhibition, oxidative stress, and photosynthetic impairment. This was evidenced by increased plant height, enhanced photosynthetic efficiency, reduced reactive oxygen species (ROS) accumulation, decreased cell death and lipid peroxidation, as well as elevated antioxidant enzyme activities (superoxide dismutase - SOD, catalase - CAT, peroxidase - POD) and levels of osmoprotectants (proline - Pro and soluble sugars - SS). Transcriptome analysis revealed that melatonin modulates numerous drought-responsive differentially expressed genes (DEGs), including multiple transcription factor (TF) families (e.g., MYB, NAC, ERF), and pathways related to photosynthesis, antioxidative metabolism, hormone signaling, and carbon metabolism. Furthermore, weighted gene co-expression network analysis (WGCNA) and Mfuzz clustering identified key gene modules and central hub genes strongly associated with photosynthetic performance and antioxidant indicators. Overexpression of StMYB and StAPX in Arabidopsis significantly enhanced drought tolerance by improving antioxidant enzyme activities and maintaining membrane stability under water-deficit conditions. This study provides a theoretical foundation for applying melatonin in potato drought stress mitigation and lays a molecular basis for developing melatonin-based agronomic strategies for improving drought tolerance.</p>","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146149117","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pseudomonas sp. UW4 ameliorates continuous cropping by optimizing soil nutrients and combating garlic oxidative damage. 假单胞菌UW4通过优化土壤养分和对抗大蒜氧化损伤来改善连作。
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-09 DOI: 10.1186/s12870-026-08305-3
Qizhang Wang, Rui Han, Bernard R Glick, Jie Tian
{"title":"Pseudomonas sp. UW4 ameliorates continuous cropping by optimizing soil nutrients and combating garlic oxidative damage.","authors":"Qizhang Wang, Rui Han, Bernard R Glick, Jie Tian","doi":"10.1186/s12870-026-08305-3","DOIUrl":"https://doi.org/10.1186/s12870-026-08305-3","url":null,"abstract":"","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146149182","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phenotypic, phytochemical and mineral characterization of wild Prunus cerasifera genotypes from Eastern Anatolia. 东安纳托利亚野生樱桃李基因型的表型、植物化学和矿物特征。
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-09 DOI: 10.1186/s12870-026-08318-y
Duygu Özelçi

This study examined the associations between genotypic variation, environmental conditions, and the phytochemical composition, mineral content, and antioxidant capacity of wild Prunus cerasifera genotypes in diverse ecogeographic regions of Eastern Anatolia (Türkiye). Thirteen genotypes were evaluated for morphological, physicochemical, and biochemical traits under varying climatic conditions, including temperature, humidity, precipitation, and solar radiation. Principal Component Analysis (PCA) revealed the multidimensional nature of this variation, indicating that environmental variables, particularly temperature and solar radiation, were associated with differences in mineral accumulation and phenolic compound levels. Warmer and sunnier environments were linked to higher nutritional density, while genotypes from more humid conditions exhibited a "dilution effect," reflecting a balance between fruit size and bioactive compound concentration. Substantial variation was observed among genotypes, with up to a five-fold difference in total phenolic content and marked differences in mineral composition, highlighting the broad genetic diversity in wild populations. Certain genotypes showed notable nutritional characteristics: 44PC01 had the highest flavonoid content and antioxidant capacity, 23PC05 accumulated higher levels of macroelements (Mg, K, Ca), and 44PC03 and 44PC07 contained the highest microelements (Fe, Zn, Cr). Partial correlation analysis, after accounting for genotypic differences, suggested that genetic background was the main source of variation in fruit quality traits, while associations with environmental variables were comparatively weaker. Overall, these findings provide evidence of phenotypic and biochemical diversity among wild P. cerasifera genotypes and emphasize their value as genetic resources for conservation and future multi-year breeding studies.

研究了东安纳托利亚不同生态地理区域野生樱桃李(Prunus cerasifera)基因型变异与环境条件、植物化学成分、矿物质含量和抗氧化能力的关系。在不同的气候条件下,包括温度、湿度、降水和太阳辐射,评估了13个基因型的形态、理化和生化性状。主成分分析(PCA)揭示了这种变化的多维性,表明环境变量,特别是温度和太阳辐射,与矿物积累和酚类化合物水平的差异有关。温暖和阳光充足的环境与更高的营养密度有关,而来自更潮湿环境的基因型表现出“稀释效应”,反映了果实大小和生物活性化合物浓度之间的平衡。基因型之间存在很大差异,总酚含量差异高达5倍,矿物成分差异显著,突出了野生群体广泛的遗传多样性。某些基因型表现出显著的营养特性:44PC01类黄酮含量和抗氧化能力最高,23PC05大量元素(Mg、K、Ca)含量较高,44PC03和44PC07微量元素(Fe、Zn、Cr)含量最高。考虑基因型差异的偏相关分析表明,遗传背景是果实品质性状变异的主要来源,与环境变量的相关性相对较弱。总之,这些发现提供了野生石杉基因型表型和生化多样性的证据,并强调了它们作为遗传资源的保护和未来多年育种研究的价值。
{"title":"Phenotypic, phytochemical and mineral characterization of wild Prunus cerasifera genotypes from Eastern Anatolia.","authors":"Duygu Özelçi","doi":"10.1186/s12870-026-08318-y","DOIUrl":"https://doi.org/10.1186/s12870-026-08318-y","url":null,"abstract":"<p><p>This study examined the associations between genotypic variation, environmental conditions, and the phytochemical composition, mineral content, and antioxidant capacity of wild Prunus cerasifera genotypes in diverse ecogeographic regions of Eastern Anatolia (Türkiye). Thirteen genotypes were evaluated for morphological, physicochemical, and biochemical traits under varying climatic conditions, including temperature, humidity, precipitation, and solar radiation. Principal Component Analysis (PCA) revealed the multidimensional nature of this variation, indicating that environmental variables, particularly temperature and solar radiation, were associated with differences in mineral accumulation and phenolic compound levels. Warmer and sunnier environments were linked to higher nutritional density, while genotypes from more humid conditions exhibited a \"dilution effect,\" reflecting a balance between fruit size and bioactive compound concentration. Substantial variation was observed among genotypes, with up to a five-fold difference in total phenolic content and marked differences in mineral composition, highlighting the broad genetic diversity in wild populations. Certain genotypes showed notable nutritional characteristics: 44PC01 had the highest flavonoid content and antioxidant capacity, 23PC05 accumulated higher levels of macroelements (Mg, K, Ca), and 44PC03 and 44PC07 contained the highest microelements (Fe, Zn, Cr). Partial correlation analysis, after accounting for genotypic differences, suggested that genetic background was the main source of variation in fruit quality traits, while associations with environmental variables were comparatively weaker. Overall, these findings provide evidence of phenotypic and biochemical diversity among wild P. cerasifera genotypes and emphasize their value as genetic resources for conservation and future multi-year breeding studies.</p>","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146141294","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Differential response to waterlogging stress in rapeseed (Brassica napus L.): insights from physiological, transcriptomic, and metabolomic analyses. 油菜(Brassica napus L.)对涝渍胁迫的差异反应:来自生理、转录组和代谢组学分析的见解。
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-09 DOI: 10.1186/s12870-026-08099-4
Menglin Zhou, Xi Song, Qingqing Yu, Bingbing Dai, Wei Zhou, Xiaofei Zan, Wuming Deng
{"title":"Differential response to waterlogging stress in rapeseed (Brassica napus L.): insights from physiological, transcriptomic, and metabolomic analyses.","authors":"Menglin Zhou, Xi Song, Qingqing Yu, Bingbing Dai, Wei Zhou, Xiaofei Zan, Wuming Deng","doi":"10.1186/s12870-026-08099-4","DOIUrl":"https://doi.org/10.1186/s12870-026-08099-4","url":null,"abstract":"","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146149127","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Timing of cotyledon post-emergence damage drives physiological compensation and resource allocation in oak seedling establishment. 子叶羽化后损伤的发生时间决定了橡树育苗过程中的生理补偿和资源分配。
IF 4.8 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-02-09 DOI: 10.1186/s12870-026-08284-5
Qiang Li, Mingming Zhao, Huihui Cheng, Xiaoying Lin, Ning Du, Yao Huang
{"title":"Timing of cotyledon post-emergence damage drives physiological compensation and resource allocation in oak seedling establishment.","authors":"Qiang Li, Mingming Zhao, Huihui Cheng, Xiaoying Lin, Ning Du, Yao Huang","doi":"10.1186/s12870-026-08284-5","DOIUrl":"https://doi.org/10.1186/s12870-026-08284-5","url":null,"abstract":"","PeriodicalId":9198,"journal":{"name":"BMC Plant Biology","volume":" ","pages":""},"PeriodicalIF":4.8,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146149153","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
BMC Plant Biology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1