ESRP2–microRNA-122 axis promotes the postnatal onset of liver polyploidization and maturation

IF 7.5 1区 生物学 Q1 CELL BIOLOGY Genes & development Pub Date : 2025-01-10 DOI:10.1101/gad.352129.124
Sushant Bangru, Jackie Chen, Nicholas Baker, Diptatanu Das, Ullas V. Chembazhi, Jessica M. Derham, Sandip Chorghade, Waqar Arif, Frances Alencastro, Andrew W. Duncan, Russ P. Carstens, Auinash Kalsotra
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Abstract

Hepatocyte polyploidy and maturity are critical to acquiring specialized liver functions. Multiple intracellular and extracellular factors influence ploidy, but how they cooperate temporally to steer liver polyploidization and maturation or how post-transcriptional mechanisms integrate into these paradigms is unknown. Here, we identified an important regulatory hierarchy in which postnatal activation of epithelial splicing regulatory protein 2 (ESRP2) stimulates processing of liver-specific microRNA (miR-122) to facilitate polyploidization, maturation, and functional competence of hepatocytes. By determining transcriptome-wide protein–RNA interactions in vivo and integrating them with single-cell and bulk hepatocyte RNA-seq data sets, we delineated an ESRP2-driven RNA processing program that drives sequential replacement of fetal-to-adult transcript isoforms. Specifically, ESRP2 binds the primary miR-122 host gene transcript to promote its processing/biogenesis. Combining constitutive and inducible ESRP2 gain- and loss-of-function mouse models with miR-122 rescue experiments, we demonstrated that timed activation of ESRP2 augments the miR-122-driven program of cytokinesis failure, ensuring the proper onset and extent of hepatocyte polyploidization.
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ESRP2-microRNA-122轴促进出生后肝脏多倍体和成熟的发生
肝细胞多倍体和成熟是获得特化肝功能的关键。多种细胞内和细胞外因素影响倍性,但它们如何暂时合作引导肝脏多倍体和成熟,以及转录后机制如何整合到这些范式中尚不清楚。在这里,我们发现了一个重要的调节层次,在这个层次中,上皮剪接调节蛋白2 (ESRP2)的出生后激活刺激肝脏特异性microRNA (miR-122)的加工,以促进肝细胞的多倍体化、成熟和功能能力。通过确定体内转录组范围内的蛋白质- RNA相互作用,并将其与单细胞和大量肝细胞RNA-seq数据集整合,我们描绘了一个esrp2驱动的RNA加工程序,该程序驱动胎儿到成人转录异构体的顺序替换。具体来说,ESRP2结合miR-122主宿主基因转录物,促进其加工/生物发生。将组成型和诱导型ESRP2功能获得和功能丧失小鼠模型与miR-122挽救实验相结合,我们证明了ESRP2的定时激活增强了miR-122驱动的细胞分裂失败程序,确保了肝细胞多倍体的适当开始和程度。
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来源期刊
Genes & development
Genes & development 生物-发育生物学
CiteScore
17.50
自引率
1.90%
发文量
71
审稿时长
3-6 weeks
期刊介绍: Genes & Development is a research journal published in association with The Genetics Society. It publishes high-quality research papers in the areas of molecular biology, molecular genetics, and related fields. The journal features various research formats including Research papers, short Research Communications, and Resource/Methodology papers. Genes & Development has gained recognition and is considered as one of the Top Five Research Journals in the field of Molecular Biology and Genetics. It has an impressive Impact Factor of 12.89. The journal is ranked #2 among Developmental Biology research journals, #5 in Genetics and Heredity, and is among the Top 20 in Cell Biology (according to ISI Journal Citation Reports®, 2021).
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