Revealing the effects of environmental and spatio-temporal variables on changes in Japanese sardine (Sardinops melanostictus) high abundance fishing grounds based on interpretable machine learning approach

IF 2.8 2区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Frontiers in Marine Science Pub Date : 2025-01-13 DOI:10.3389/fmars.2024.1503292
Yongchuang Shi, Lei Yan, Shengmao Zhang, Fenghua Tang, Shenglong Yang, Wei Fan, Haibin Han, Yang Dai
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Abstract

The construction of accurate and interpretable predictive model for high abundance fishing ground is conducive to better sustainable fisheries production and carbon reduction. This article used refined statistical maps to visualize the spatial and temporal patterns of catch changes based on the 2014-2021 fishery statistics of the Japanese sardine Sardinops melanostictus fishery in the Northwest Pacific Ocean. Three models (XGBoost, LightGBM, and CatBoost) and two variable importance visualization methods (model built-in (split) and SHAP methods) were used for comparative analysis to determine the optimal modeling and visualization strategies. Results: 1) From 2014 to 2021, the annual catch showed an overall increasing trend and peaked at 220,009.063 tons in 2021; the total monthly catch increased and then decreased, with a peak of 76, 033.4944 tons (July), and the catch was mainly concentrated in the regions of 39.5°-43°N and 146.75°-155.75°E; 2) Catboost model predicted better than LightGBM and XGBoost models, with the highest values of accuracy and F1-score, 73.8% and 75.31%, respectively; 3) the overall importance ranking of the model’s built-in method differed significantly from that in the SHAP method, and the overall importance ranking of the spatial variables in the SHAP method increased. Compared to the built-in method, the SHAP method informs the magnitude and direction of the influence of each variable at the global and local levels. The results of the research help us to select the optimal model and the optimal visualization method to construct a prediction model for the Japanese sardine fishing grounds in the Northwest Pacific Ocean, which will provide a scientific basis for the Japanese sardine fishery to achieve environmental and economically sustainable fishery development.
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基于可解释机器学习方法揭示环境和时空变量对日本沙丁鱼(Sardinops melanotictus)高丰渔场变化的影响
构建准确、可解释的高丰度渔场预测模型,有利于更好地实现渔业可持续生产和碳减排。基于2014-2021年西北太平洋日本沙丁鱼(Sardinops melanotictus)渔业统计数据,采用精细统计图对捕捞量变化的时空格局进行可视化分析。采用三种模型(XGBoost、LightGBM和CatBoost)和两种不同重要性的可视化方法(模型内置(拆分)和SHAP方法)进行对比分析,确定最优的建模和可视化策略。结果:1)2014 - 2021年,年捕获量总体呈上升趋势,2021年达到峰值220,009.063 t;月总渔获量呈先增后减的趋势,最高达76033.4944 t(7月),渔获量主要集中在39.5°-43°N和146.75°-155.75°E区域;2) Catboost模型的预测效果优于LightGBM和XGBoost模型,准确率和f1得分最高,分别为73.8%和75.31%;3)模型内嵌方法与SHAP方法的总体重要度排序存在显著差异,空间变量的总体重要度排序有所提高。与内置方法相比,SHAP方法在全局和局部级别通知每个变量影响的大小和方向。研究结果有助于我们选择最优模型和最优可视化方法,构建西北太平洋日本沙丁鱼渔场的预测模型,为日本沙丁鱼渔业实现环境和经济可持续的渔业发展提供科学依据。
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来源期刊
Frontiers in Marine Science
Frontiers in Marine Science Agricultural and Biological Sciences-Aquatic Science
CiteScore
5.10
自引率
16.20%
发文量
2443
审稿时长
14 weeks
期刊介绍: Frontiers in Marine Science publishes rigorously peer-reviewed research that advances our understanding of all aspects of the environment, biology, ecosystem functioning and human interactions with the oceans. Field Chief Editor Carlos M. Duarte at King Abdullah University of Science and Technology Thuwal is supported by an outstanding Editorial Board of international researchers. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, policy makers and the public worldwide. With the human population predicted to reach 9 billion people by 2050, it is clear that traditional land resources will not suffice to meet the demand for food or energy, required to support high-quality livelihoods. As a result, the oceans are emerging as a source of untapped assets, with new innovative industries, such as aquaculture, marine biotechnology, marine energy and deep-sea mining growing rapidly under a new era characterized by rapid growth of a blue, ocean-based economy. The sustainability of the blue economy is closely dependent on our knowledge about how to mitigate the impacts of the multiple pressures on the ocean ecosystem associated with the increased scale and diversification of industry operations in the ocean and global human pressures on the environment. Therefore, Frontiers in Marine Science particularly welcomes the communication of research outcomes addressing ocean-based solutions for the emerging challenges, including improved forecasting and observational capacities, understanding biodiversity and ecosystem problems, locally and globally, effective management strategies to maintain ocean health, and an improved capacity to sustainably derive resources from the oceans.
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