Backbone resonance assignments of PhoCl, a photocleavable protein.

IF 0.8 4区 生物学 Q4 BIOPHYSICS Biomolecular NMR Assignments Pub Date : 2025-01-18 DOI:10.1007/s12104-025-10215-8
Runhan Wang, Lina Zhu, Junfeng Wang, Lei Zhu
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Abstract

PhoCl is a photocleavable protein engineered from a green-to-red photoconvertible fluorescent protein by circular permutation, and has been used in various optogenetic applications including precise control of protein localization and activity in cells. Upon violet light illumination, PhoCl undergoes a β-elimination reaction to be cleaved at the chromophore, resulting in spontaneous dissociation into a large empty barrel and a small C-terminal peptide. However, the structural determinants and the mechanism of the PhoCl photocleavage remain elusive, hindering the further development of more robust photocleavable optogenetic tools. Here, we report the backbone resonance assignments of PhoCl as a basis for studying the violet-light-induced self-cleavage mechanism of PhoCl.

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PhoCl蛋白的主链共振配位。
PhoCl是一种光可切割蛋白,由绿色到红色的光可转换荧光蛋白通过圆形排列工程而成,已用于各种光遗传学应用,包括精确控制蛋白质在细胞中的定位和活性。在紫光照射下,PhoCl发生β-消除反应,在发色团处被劈裂,导致自发解离成一个大的空桶和一个小的c端肽。然而,PhoCl光切割的结构决定因素和机制仍然难以捉摸,这阻碍了更强大的光切割光遗传工具的进一步发展。在这里,我们报道了PhoCl的主共振分配,作为研究PhoCl紫外光诱导自裂机制的基础。
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来源期刊
Biomolecular NMR Assignments
Biomolecular NMR Assignments 生物-光谱学
CiteScore
1.70
自引率
11.10%
发文量
59
审稿时长
6-12 weeks
期刊介绍: Biomolecular NMR Assignments provides a forum for publishing sequence-specific resonance assignments for proteins and nucleic acids as Assignment Notes. Chemical shifts for NMR-active nuclei in macromolecules contain detailed information on molecular conformation and properties. Publication of resonance assignments in Biomolecular NMR Assignments ensures that these data are deposited into a public database at BioMagResBank (BMRB; http://www.bmrb.wisc.edu/), where they are available to other researchers. Coverage includes proteins and nucleic acids; Assignment Notes are processed for rapid online publication and are published in biannual online editions in June and December.
期刊最新文献
Backbone assignment of the N-terminal domain of the A subunit of the Bacillus cereus GerI germinant receptor. Backbone resonance assignments of PhoCl, a photocleavable protein. Assignment of the N-terminal domain of mouse cGAS. Backbone NMR resonance assignment of Sis1, a type B J-domain protein from Saccharomyces cerevisiae. Correction: 1H, 13C, and 15N resonance assignments of the amyloidogenic peptide SEM2(49-107) by NMR spectroscopy.
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