MXene-based SERS spectroscopic analysis of exosomes for lung cancer differential diagnosis with deep learning.

IF 2.9 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Biomedical optics express Pub Date : 2024-12-23 eCollection Date: 2025-01-01 DOI:10.1364/BOE.547176
Xi Chen, Hongyi Liu, Dandan Fan, Nan Chen, Pei Ma, Xuedian Zhang, Hui Chen
{"title":"MXene-based SERS spectroscopic analysis of exosomes for lung cancer differential diagnosis with deep learning.","authors":"Xi Chen, Hongyi Liu, Dandan Fan, Nan Chen, Pei Ma, Xuedian Zhang, Hui Chen","doi":"10.1364/BOE.547176","DOIUrl":null,"url":null,"abstract":"<p><p>Lung cancer with heterogeneity has a high mortality rate due to its late-stage detection and chemotherapy resistance. Liquid biopsy that discriminates tumor-related biomarkers in body fluids has emerged as an attractive technique for early-stage and accurate diagnosis. Exosomes, carrying membrane and cytosolic information from original tumor cells, impart themselves endogeneity and heterogeneity, which offer extensive and unique advantages in the field of liquid biopsy for cancer differential diagnosis. Herein, we demonstrate a Gramian angular summation field and MobileNet V2 (GASF-MobileNet)-assisted surface-enhanced Raman spectroscopy (SERS) technique for analyzing exosomes, aimed at precise diagnosis of lung cancer. Specifically, a composite substrate was synthesized for SERS detection of exosomes based on Ti<sub>3</sub>C<sub>2</sub>Tx Mxene and the array of gold-silver core-shell nanocubes (MGS), that combines sensitivity and signal stability. The employment of MXene facilitates the non-selective capture and enrichment of exosomes. To overcome the issue of potentially overlooking spatial features in spectral data analysis, 1-D spectra were first transformed into 2-D images through GASF. By using transformed images as the input data, a deep learning model based on the MobileNet V2 framework extracted spectral features from higher dimensions, which identified different non-small cell lung cancer (NSCLC) cell lines with an overall accuracy of 95.23%. Moreover, the area under the curve (AUC) for each category exceeded 0.95, demonstrating the great potential of integrating label-free SERS with deep learning for precise lung cancer differential diagnosis. This approach allows routine cancer management, and meanwhile, its non-specific analysis of SERS signatures is anticipated to be expanded to other cancers.</p>","PeriodicalId":8969,"journal":{"name":"Biomedical optics express","volume":"16 1","pages":"303-319"},"PeriodicalIF":2.9000,"publicationDate":"2024-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11729284/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical optics express","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1364/BOE.547176","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0

Abstract

Lung cancer with heterogeneity has a high mortality rate due to its late-stage detection and chemotherapy resistance. Liquid biopsy that discriminates tumor-related biomarkers in body fluids has emerged as an attractive technique for early-stage and accurate diagnosis. Exosomes, carrying membrane and cytosolic information from original tumor cells, impart themselves endogeneity and heterogeneity, which offer extensive and unique advantages in the field of liquid biopsy for cancer differential diagnosis. Herein, we demonstrate a Gramian angular summation field and MobileNet V2 (GASF-MobileNet)-assisted surface-enhanced Raman spectroscopy (SERS) technique for analyzing exosomes, aimed at precise diagnosis of lung cancer. Specifically, a composite substrate was synthesized for SERS detection of exosomes based on Ti3C2Tx Mxene and the array of gold-silver core-shell nanocubes (MGS), that combines sensitivity and signal stability. The employment of MXene facilitates the non-selective capture and enrichment of exosomes. To overcome the issue of potentially overlooking spatial features in spectral data analysis, 1-D spectra were first transformed into 2-D images through GASF. By using transformed images as the input data, a deep learning model based on the MobileNet V2 framework extracted spectral features from higher dimensions, which identified different non-small cell lung cancer (NSCLC) cell lines with an overall accuracy of 95.23%. Moreover, the area under the curve (AUC) for each category exceeded 0.95, demonstrating the great potential of integrating label-free SERS with deep learning for precise lung cancer differential diagnosis. This approach allows routine cancer management, and meanwhile, its non-specific analysis of SERS signatures is anticipated to be expanded to other cancers.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
基于mxens的外泌体SERS光谱分析用于肺癌鉴别诊断的深度学习。
异质性肺癌因其发现较晚和化疗耐药,死亡率较高。鉴别体液中肿瘤相关生物标志物的液体活检已成为早期和准确诊断的一种有吸引力的技术。外泌体携带来自原始肿瘤细胞的膜和细胞质信息,具有内生性和异质性,在液体活检用于癌症鉴别诊断领域具有广泛而独特的优势。在此,我们展示了Gramian角和场和MobileNet V2 (GASF-MobileNet)辅助表面增强拉曼光谱(SERS)技术用于分析外泌体,旨在精确诊断肺癌。具体而言,我们基于Ti3C2Tx Mxene和金银核壳纳米立方阵列(MGS)合成了一种用于外泌体SERS检测的复合底物,该底物兼具灵敏度和信号稳定性。MXene的使用促进了外泌体的非选择性捕获和富集。为了克服光谱数据分析中可能忽略空间特征的问题,首先通过GASF将一维光谱转换为二维图像。利用变换后的图像作为输入数据,基于MobileNet V2框架的深度学习模型从更高维度提取光谱特征,识别出不同的非小细胞肺癌(NSCLC)细胞系,总体准确率达到95.23%。此外,每个类别的曲线下面积(AUC)均超过0.95,表明将无标签SERS与深度学习相结合用于肺癌精确鉴别诊断的潜力巨大。该方法允许常规的癌症管理,同时,其对SERS特征的非特异性分析有望扩展到其他癌症。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Biomedical optics express
Biomedical optics express BIOCHEMICAL RESEARCH METHODS-OPTICS
CiteScore
6.80
自引率
11.80%
发文量
633
审稿时长
1 months
期刊介绍: The journal''s scope encompasses fundamental research, technology development, biomedical studies and clinical applications. BOEx focuses on the leading edge topics in the field, including: Tissue optics and spectroscopy Novel microscopies Optical coherence tomography Diffuse and fluorescence tomography Photoacoustic and multimodal imaging Molecular imaging and therapies Nanophotonic biosensing Optical biophysics/photobiology Microfluidic optical devices Vision research.
期刊最新文献
Development and performance validation of an affordable and portable high-resolution darkfield polarization-sensitive multispectral imaging microscope for the assessment of radiation dermatitis and fibrosis. GJFocuser: a Gaussian difference and joint learning-based autofocus method for whole slide imaging. MXene-based SERS spectroscopic analysis of exosomes for lung cancer differential diagnosis with deep learning. Volumetric imaging of trabecular meshwork dynamic motion using 600 kHz swept source optical coherence tomography. Design concepts for advanced-technology intraocular lenses [Invited].
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1