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Erratum: Imaging otoconia by second harmonic generation microscopy: erratum. 勘误:二次谐波生成显微镜成像耳蜗:勘误。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-24 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.587992
Kennedy Brittain, MacAulay Harvey, Richard Cisek, Saranyan Pillai, Sean D Christie, Danielle Tokarz

[This corrects the article on p. 3593 in vol. 13, PMID: 35781949.].

[这更正了第13卷第3593页的文章,PMID: 35781949]。
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引用次数: 0
Automated animal gimbal steering for retinal imaging and stimulation. 用于视网膜成像和刺激的自动动物万向节转向。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-24 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.582530
Karteek Kunala, Gastón A Ayubi, Joel A Franco, Vinit B Mahajan, Alfredo Dubra

Here, we propose optomechanical devices for steering anesthetized animals during retinal imaging and/or stimulation with stationary ophthalmoscopes. Simple operating procedures ensure that the entrance pupil of the eye remains centered on the exit pupil of the ophthalmoscope during steering, to avoid vignetting. The devices, built with commercially available manual linear stages and motorized rotating devices, can be used to capture image sequences for tiling, as is often done in microscopy. This automated steering system, demonstrated here in mice, is applicable to other animal species and imaging modalities, as well as explanted eyes. The use of these devices can reduce imaging time and retinal light exposure, both of which are important when using ophthalmoscopes with small fields of view, such as adaptive optics ophthalmoscopes, while also improving animal welfare.

在这里,我们提出了光机械装置,用于指导麻醉动物在视网膜成像和/或固定检眼镜刺激。简单的操作程序,确保在操作过程中眼睛的入口瞳孔保持在检眼镜的出口瞳孔的中心,以避免渐晕。该装置由市售的手动线性阶段和电动旋转装置组成,可用于捕获图像序列以平铺,就像在显微镜中经常做的那样。这个在老鼠身上展示的自动转向系统,也适用于其他动物物种和成像模式,以及移植的眼睛。使用这些设备可以减少成像时间和视网膜光暴露,当使用小视场的检眼镜(如自适应光学检眼镜)时,这两者都很重要,同时还可以改善动物福利。
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引用次数: 0
qtOCT: quantitative transmission optical coherence tomography. 定量透射光学相干层析成像。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-23 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.580168
Wojciech Krauze, Martyna Mazur, Arkadiusz Kuś, Aleksandra Piekarska

Transmission optical coherence tomography (OCT) enables analysis of biological specimens in vitro through the detection of forward-scattered light. Up to now, transmission OCT has been considered a technique that cannot directly retrieve quantitative phase and is thus a qualitative method. In this paper, we present qtOCT, a novel quantitative transmission optical coherence tomography method. Unlike existing approaches, qtOCT allows for a direct, easy, fast, and rigorous retrieval of 2D integrated phase information from transmission full-field swept-source OCT measurements. Our method is based on coherence gating and allows user-defined temporal measurement range selection, making it potentially suitable for analyzing multiple-scattering samples. In the weak-scattering regime, we demonstrate high consistency between qtOCT and digital holographic microscopy phase images, whereas in the multiple-scattering regime, we show the superiority of qtOCT. This approach enhances transmission OCT capabilities, positioning it as a viable alternative to existing quantitative phase imaging techniques.

透射光学相干断层扫描(OCT)能够通过检测前向散射光来分析体外生物标本。到目前为止,透射OCT一直被认为是一种不能直接提取定量相位的技术,因此是一种定性方法。本文提出了一种新的定量透射光学相干层析成像方法qtOCT。与现有的方法不同,qtOCT允许直接、简单、快速和严格地从传输全场扫描源OCT测量中检索二维集成相位信息。我们的方法基于相干门控,允许用户自定义的时间测量范围选择,使其潜在地适用于分析多散射样品。在弱散射区,我们证明了qtOCT与数字全息显微镜相图的高度一致性,而在多重散射区,我们证明了qtOCT的优势。这种方法增强了传输OCT的能力,将其定位为现有定量相位成像技术的可行替代方案。
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引用次数: 0
Imaging of Tissue and Cell Dynamics: introduction to the feature issue. 组织和细胞动力学成像:介绍特征问题。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-23 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.585777
Kate Grieve, Kostadinka Bizheva, Gereon Hüttmann, Yoshiaki Yasuno

The guest editors introduce a feature issue on the topic of imaging of tissue and cell dynamics.

客座编辑介绍了一个关于组织和细胞动力学成像主题的专题问题。
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引用次数: 0
Lung cancer screening based on plasma-derived exosomes via droplet coating deposition Raman spectroscopy and machine learning. 基于微滴涂层沉积拉曼光谱和机器学习的血浆源性外泌体肺癌筛查。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-22 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.581880
Yuyi Li, Shuting Xiao, Jing Huang, Zongze Li, Chunling Pan, Ming Dong, Qiuqiang Zhan

Lung cancer is the leading cause of cancer-related mortality worldwide, making early screening crucial for improving patient survival. In recent years, exosomes have garnered significant attention as promising biomarkers for the detection of lung cancer. Their easy isolation from body fluids, such as blood and urine, makes them a perfect sample for liquid biopsy, while liquid biopsy is widely used in clinical research. Droplet coating deposition Raman (DCDR) spectroscopy is well-suited for exosome detection due to its molecular fingerprints, non-invasiveness, low sample volume requirements, and minimal/no sample preparation. In this study, we combined DCDR technology with machine learning algorithms to screen for lung cancer based on plasma-derived exosomes. High-quality exosomes were isolated from clinical blood samples via ultracentrifugation, exhibiting a characteristic cup-shaped morphology with an average diameter of 130 nm and expressing canonical exosome markers (CD63 and CD81). Although subtle differences were observed between the Raman spectra of exosomes from lung cancer patients and from healthy individuals, principal component analysis (PCA) revealed the presence of a batch effect across the samples. To enable diagnosis while minimizing the impact of batch effect, the support vector machine (SVM) model outperformed the linear discriminant analysis (LDA) model, achieving 95.60% accuracy (area under the curve (AUC) = 0.996) at the spectrum level and 100% accuracy at the patient level. These results demonstrate that Raman spectroscopy is an up-and-coming tool for rapid lung cancer screening, offering the advantages of low cost, ease of operation, low sample volume requirements, and high speed.

肺癌是全球癌症相关死亡的主要原因,因此早期筛查对提高患者生存率至关重要。近年来,外泌体作为检测肺癌的有前途的生物标志物受到了极大的关注。它们很容易从血液和尿液等体液中分离出来,使其成为液体活检的理想样本,而液体活检广泛用于临床研究。液滴涂层沉积拉曼(DCDR)光谱由于其分子指纹、非侵入性、低样本量要求和最少/不需要样品制备而非常适合于外显体检测。在这项研究中,我们将DCDR技术与机器学习算法结合起来,基于血浆源性外泌体筛查肺癌。通过超离心从临床血液样本中分离出高质量的外泌体,表现出典型的杯状形态,平均直径为130 nm,表达典型的外泌体标记物(CD63和CD81)。尽管肺癌患者和健康个体外泌体的拉曼光谱之间存在细微差异,但主成分分析(PCA)揭示了样品之间存在批次效应。为了使诊断同时最小化批效应的影响,支持向量机(SVM)模型优于线性判别分析(LDA)模型,在光谱水平上达到95.60%的准确率(曲线下面积(AUC) = 0.996),在患者水平上达到100%的准确率。这些结果表明,拉曼光谱具有成本低、操作方便、样本量要求低、速度快等优点,是一种很有前途的肺癌快速筛查工具。
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引用次数: 0
Voltage imaging with periodic structured illumination. 周期性结构照明电压成像。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-22 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.573621
Forest Speed, Alec Teel, Timothy Young, Larry V Baker, Gregory L Futia, Diego Restrepo, Emily A Gibson

We utilize periodic structured illumination with pseudo-HiLo (pHiLo) image reconstruction for in vivo voltage imaging. We demonstrate reduced signal from out-of-focus cells, which contaminates voltage activity for in-focus cells of interest, with pHiLo compared to traditional widefield recordings taken with uniform illumination and pseudo-widefield (pWF) reconstructions. We compare spike peak-to-noise ratio (PNR) and cell-background correlation for time courses extracted using pHiLo and soma-targeted widefield illumination (TI). We discuss tradeoffs between out-of-focus light reduction, signal-to-noise ratio, and temporal resolution for pHiLo in the context of high-speed voltage imaging in awake mice.

我们利用周期性结构照明与伪hilo (pHiLo)图像重建进行体内电压成像。与使用均匀照明和伪宽视场(pWF)重建的传统宽视场记录相比,我们证明了来自失焦细胞的信号减少,这会污染感兴趣的焦内细胞的电压活动。我们比较了使用pHiLo和soma靶向宽视场照明(TI)提取的时间过程的峰值峰值噪声比(PNR)和细胞背景相关性。我们讨论了在清醒小鼠高速电压成像的背景下,pHiLo的失焦光减少,信噪比和时间分辨率之间的权衡。
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引用次数: 0
Development of a laser speckle contrast imaging analysis pipeline reveals a triphasic retinal blood flow waveform. 激光散斑对比成像分析管道的发展揭示了三相视网膜血流波形。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-22 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.575278
Alexander J Tate, Gary C Mouradian, Daniel M Lipinski

Laser speckle contrast imaging (LSCI) is an under-utilized retinal imaging modality capable of non-invasively generating contrast-free, widefield maps of retinal blood flow from which multiple metrics of retinal hemodynamic function can be derived using relatively simple flood illumination instrumentation. Technical and computational advancements have improved spatiotemporal resolution and data extraction to the extent that three-peak blood flow waveforms, currently unaccounted for in LSCI nomenclature, are consistently revealed in the murine retina. Herein, we utilize a custom LSCI instrument and newly developed analysis pipeline to demonstrate the prevalence of the triphasic blood flow waveform, map timing of its first and third peaks to systole and diastole, respectively, via corroboration with arterial cannulation, and measure basal hemodynamic values for global, arterial, and venous retinal blood flow.

激光散斑对比成像(LSCI)是一种未被充分利用的视网膜成像方式,它能够无创地生成无对比度、宽视场的视网膜血流图,从中可以使用相对简单的泛光照明仪器得出视网膜血流动力学功能的多个指标。技术和计算的进步已经提高了时空分辨率和数据提取的程度,三峰血流波形,目前在LSCI术语中未被解释,在小鼠视网膜中一致显示。在此,我们利用定制的LSCI仪器和新开发的分析管道来展示三相血流波形的普遍性,通过动脉插管的证实,分别绘制其第一和第三峰的收缩期和舒张期的时间,并测量总体、动脉和静脉视网膜血流的基础血流动力学值。
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引用次数: 0
Evaluating retinal image quality for myopia control lenses in a synthetic accommodative wavefront model. 在合成调节波前模型中评价近视控制镜片的视网膜图像质量。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-19 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.549285
María Mechó-García, Paulo Fernandes, José Manuel González-Méijome, Miguel Faria-Ribeiro

This study uses a wavefront model to evaluate the effects of contact lenses on retinal image quality (RIQ) as a function of target vergence (TV). Three hundred synthetic eyes were generated using an accommodative wavefront model to simulate the changes in RIQ with accommodation. The synthetic eyes wavefronts were computationally combined using direct wavefront summation with two myopia control CLs. One has a +2.00D treatment zone dual-focus (DF) design (MiSight), and the other has an extended depth of focus (EDOF) design (Mylo). Peak image quality was calculated for the naked eye, with CLs in the relaxed state, and for an accommodative demand of -2.5D. Additionally, the predicted accommodative response (change in accommodative response that maximizes RIQ) was calculated. The mean RIQ (normalized between 0 and 1) for the relaxed eye was 0.42 ± 0.10 in the naked eye. It decreased to 0.26 ± 0.05 with the DF and threefold to 0.15 ± 0.04 with the EDOF. For a TV = -2.5D, the RIQ was 0.34 ± 0.09 in the naked eye condition, 0.24 ± 0.07 with the DF, and 0.19 ± 0.03 with the EDOF. For the TV, the CL's effective add power, the accommodative RIQ showed a secondary peak, with RIQs of 0.08 ± 0.03 (DF) and 0.12 ± 0.04 (EDOF). The theoretical accommodative response (AR) of the naked eye was 2.33 ± 0.20 D, while with the DF and EDOF, it was 2.23 ± 0.39 D and 1.75 ± 0.22 D, respectively. Both myopia control CLs reduced RIQ at a TV of 0 D. At a TV = -2.5D; both lenses caused a secondary peak in the RIQ through focus. With EDOF, the secondary peak was less than 0.1 D from the maximum peak, likely due to its EDOF design. The theoretical AR was reduced with both myopia control CLs, 0.27 D for DF CLs and 0.75 D for EDOF CLs. These results indicate that both lenses impose significant limitations on RIQ and theoretical AR, align with findings from previous studies on subjective optical performance, and validate the model as a useful testing tool.

本研究使用波前模型来评估隐形眼镜对视网膜图像质量(RIQ)的影响,并将RIQ作为目标散度(TV)的函数。使用调节波前模型生成300只人工眼睛,模拟调节后RIQ的变化。用直接波前求和法计算合成眼波前与两个近视控制CLs的组合。一个具有+2.00D处理区双焦(DF)设计(MiSight),另一个具有扩展焦深(EDOF)设计(Mylo)。计算了CLs处于放松状态时裸眼的峰值图像质量,并考虑了-2.5D的调节需求。此外,还计算了预测的调节反应(使RIQ最大化的调节反应变化)。裸眼松弛时平均RIQ(归一化0 ~ 1)为0.42±0.10。DF降低到0.26±0.05,EDOF降低到3倍,为0.15±0.04。TV = -2.5D时,裸眼条件下RIQ为0.34±0.09,DF条件下为0.24±0.07,EDOF条件下为0.19±0.03。对于TV, CL的有效附加功率,可调节RIQ出现二次峰值,RIQ分别为0.08±0.03 (DF)和0.12±0.04 (EDOF)。裸眼的理论调节响应(AR)为2.33±0.20 D, DF和EDOF分别为2.23±0.39 D和1.75±0.22 D。两种近视控制CLs在电视为0 d时都降低了RIQ;两种透镜通过对焦引起RIQ的二次峰值。使用EDOF时,次峰距离最大峰小于0.1 D,可能是由于其EDOF设计。两种近视控制CLs的理论AR均降低,DF CLs为0.27 D, EDOF CLs为0.75 D。这些结果表明,这两种透镜对RIQ和理论AR都有显著的限制,与之前关于主观光学性能的研究结果一致,并验证了该模型是一个有用的测试工具。
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引用次数: 0
Investigating neurovascular responses of the peripapillary retinal artery to focal flicker stimulation of temporal retinal neurons in the living human eye using AO-OCT. 用AO-OCT观察活体人眼视网膜乳头周围动脉对颞视网膜神经元聚焦闪烁刺激的神经血管反应。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-19 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.577790
Arwa Arrashoud, Morgan Nemeth, Kazuhiro Kurokawa

We have developed an AO-OCT-based method to characterize microscopic vasodilatory responses of peripapillary major retinal artery (ppRA) to the focal luminous flicker stimulation of peripheral retinal neurons (>15° temporal to the fovea) with various mean illuminance levels, frequencies, and spatial patterns in the living human eye. The results have demonstrated that our proposed method can effectively measure transient, microscopic vasodilatory responses of the ppRA to the focal flicker stimulation, which increased monotonically with mean illuminance levels (1, 5 and 11lx), and exhibited frequency band-pass-like behavior (2, 5, 10, 15, 20 and 30 Hz) consistent with expected increases in the activities of retinal ganglion cells (RGCs) and their associated axons. We also found that the proposed method can be used to measure the spatial interdependency of their neurovascular responses: superior arcuate ppRA response to the superior-temporal flicker was 58% greater than that to the inferior-temporal flicker, and the inferior arcuate ppRA response to the inferior-temporal flicker was 86% greater than that to the superior-temporal flicker. Collectively, these results indicate that, using the proposed method, we can now test the hypothesis that major retinal arteries respond in an orchestrated manner to increased firing activities of RGCs and their associated axons, by accounting for the spatial coordinates between the stimulated neurons and the ppRA arcs in the living human eye.

我们开发了一种基于ao - oct的方法来表征人眼中不同平均亮度水平、频率和空间模式下视网膜周围神经元(>15°颞到中央凹)的焦点发光闪烁刺激下视网膜乳头周围大动脉(ppRA)的微观血管舒张反应。结果表明,我们提出的方法可以有效地测量ppRA对焦点闪烁刺激的瞬态、微观血管扩张反应,该反应随平均照度水平(1、5和11lx)单调增加,并表现出频带通样行为(2、5、10、15、20和30 Hz),这与视网膜神经节细胞(RGCs)及其相关轴突活动的预期增加一致。我们还发现,该方法可用于测量其神经血管反应的空间相互依赖性:上弓形动脉对颞上闪烁的反应比对颞下闪烁的反应高58%,下弓形动脉对颞下闪烁的反应比对颞上闪烁的反应高86%。总的来说,这些结果表明,使用所提出的方法,我们现在可以通过考虑受刺激的神经元和人眼中ppRA弧之间的空间坐标,来验证视网膜主要动脉以一种协调的方式对RGCs及其相关轴突的放电活动增加做出反应的假设。
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引用次数: 0
Longitudinal investigation of spatial memory and retinal parameters in a 5xFAD model of Alzheimer's disease reveals differences dependent on genotype and sex. 阿尔茨海默病5xFAD模型中空间记忆和视网膜参数的纵向研究揭示了依赖于基因型和性别的差异
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-19 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.579020
Georg Ladurner, Conrad W Merkle, Lucas May, Sybren Worm, Yash Patel, Maria Varaka, Magdalena Daurer, Laurenz Jauk, Roland Rabl, Philipp Königshofer, Gerhard Garhöfer, Manuela Prokesch, Bernhard Baumann

The retinal phenotype of Alzheimer's disease (AD), its connection to spatial memory, and the influence of sex on the phenotype are poorly understood. Here, we investigate the retina and spatial memory of 5xFAD mouse models of AD by measuring retinal and behavioral parameters. A custom-built optical coherence tomography (OCT) system is used to image the retina of 32 transgenic and 32 non-transgenic 5xFAD mice over the course of 6 months (3-9 months of age). The Morris water maze (MWM) test was performed to examine correlations between the retinal and spatial memory phenotype of the mouse model. Total retinal and inner retinal layer thickness increased slightly over the measurement period, while outer retinal layer and retinal nerve fiber layer thickness showed no significant change. The correlation analysis between MWM and layer thickness data revealed a positive correlation between inner nuclear layer thickness and spatial memory capabilities. OCT and MWM data revealed sex-based differences in the retinal phenotype of the 5xFAD mouse model, with changes in retinal thickness in different stages of the study and dissimilar correlations between retinal and spatial memory phenotype.

阿尔茨海默病(AD)的视网膜表型,其与空间记忆的联系,以及性别对表型的影响尚不清楚。在这里,我们通过测量视网膜和行为参数来研究5xFAD AD小鼠模型的视网膜和空间记忆。使用定制的光学相干断层扫描(OCT)系统对32只转基因和32只非转基因5xFAD小鼠的视网膜进行了6个月(3-9个月)的成像。Morris水迷宫(Morris water maze, MWM)检验小鼠视网膜与空间记忆表型之间的相关性。测量期间视网膜总厚度和视网膜内层厚度略有增加,而视网膜外层和视网膜神经纤维层厚度无明显变化。核心层厚度与核心层厚度的相关分析表明,核心层厚度与核心层空间记忆能力呈正相关。OCT和MWM数据揭示了5xFAD小鼠模型视网膜表型的性别差异,视网膜厚度在研究的不同阶段发生变化,视网膜与空间记忆表型之间存在不同的相关性。
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引用次数: 0
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Biomedical optics express
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