Inhibition of B-cell activating factor activity using active compounds from Physalis angulata in the mechanism of nephrotic syndrome improvement: A computational approach.

Narra J Pub Date : 2024-12-01 Epub Date: 2024-09-05 DOI:10.52225/narra.v4i3.859
Astrid K Kardani, Loeki E Fitri, Nur Samsu, Krisni Subandiyah, Agustina T Endharti, Dian Nugrahenny, Syahputra Wibowo
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Abstract

Nephrotic syndrome, a multifaceted medical condition characterized by significant proteinuria, has recently prompted a reorientation of research efforts toward B-cell-mediated mechanisms. This shift underscores the pivotal role played by B-cells in its pathogenesis. The aim of this study was to explore potential therapeutic pathways, with specific attention given to compounds found in Physalis angulata, including withanolides, such as physalins, which constitute one of the five distinct withanolide subgroups identified in Physalis angulata. Furthermore, the study assessed the monoclonal antibody belimumab, designed to target B-cell activating factor (BAFF) and its associated receptors (TACI, BCMA, and BAFF-R). Various research techniques were employed, encompassing data mining, bioactivity analysis, Absorption, Distribution, Metabolism, Excretion, and Toxicity (ADMET) profiling, molecular modeling, and docking studies. Withanolide was demonstrated as a potential inhibitor for the protein BAFF, showing a binding energy of -7.1 kcal/mol. Physalin F emerged as the leading candidate inhibitor for the protein TACI, with a binding energy of -8.3 kcal/mol. Similarly, withanolide was identified as the top inhibitor candidate for the protein BCMA, exhibiting a binding energy of -7.0 kcal/mol. The most favorable interaction with BAFF-R was physalin F, which displayed a binding energy of -8.0 kcal/mol. Moreover, molecular dynamic simulation suggested that physalin F was able to maintain protein stability, hence being a good inhibitor candidate for BAFF-R and TACI proteins. The results of this investigation demonstrated substantial promise, indicating that these withanolides and withaphysalin A compounds derived from Physalis angulata offer alternative avenues for B-cell targeting. Consequently, this study presents opportunities for pioneering treatments in the management of nephrotic syndrome.

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利用角Physalis活性化合物抑制b细胞活化因子活性改善肾病综合征的机制:一种计算方法。
肾病综合征是一种以大量蛋白尿为特征的多方面疾病,最近促使研究人员重新定位于b细胞介导的机制。这一转变强调了b细胞在其发病机制中所起的关键作用。本研究的目的是探索潜在的治疗途径,特别关注在Physalis angulata中发现的化合物,包括withanolides,如physalins,它构成Physalis angulata中鉴定的五个不同的withanolide亚群之一。此外,该研究评估了针对b细胞活化因子(BAFF)及其相关受体(TACI, BCMA和BAFF- r)的单克隆抗体belimumab。采用了各种研究技术,包括数据挖掘、生物活性分析、吸收、分布、代谢、排泄和毒性(ADMET)分析、分子模型和对接研究。Withanolide被证明是BAFF蛋白的潜在抑制剂,其结合能为-7.1 kcal/mol。Physalin F作为TACI蛋白的主要候选抑制剂,其结合能为-8.3 kcal/mol。同样,威纳醇内酯被确定为BCMA蛋白的首选抑制剂候选物,其结合能为-7.0 kcal/mol。与BAFF-R相互作用最有利的是physalin F,其结合能为-8.0 kcal/mol。此外,分子动力学模拟表明,physalin F能够维持蛋白的稳定性,因此是BAFF-R和TACI蛋白的良好抑制剂候选物。这项研究的结果显示了巨大的希望,表明这些从角Physalis中提取的withanolides和withophyysalin A化合物为b细胞靶向提供了另一种途径。因此,这项研究为肾病综合征的管理提供了开拓性治疗的机会。
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