Bioinformatic approach to explain how Mg from seawater may be incorporated into coral skeletons.

IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Royal Society Open Science Pub Date : 2025-01-22 eCollection Date: 2025-01-01 DOI:10.1098/rsos.232011
Tomoko Bell, Akira Iguchi, Yoshikazu Ohno, Kazuhiko Sakai, Yusuke Yokoyama
{"title":"Bioinformatic approach to explain how Mg from seawater may be incorporated into coral skeletons.","authors":"Tomoko Bell, Akira Iguchi, Yoshikazu Ohno, Kazuhiko Sakai, Yusuke Yokoyama","doi":"10.1098/rsos.232011","DOIUrl":null,"url":null,"abstract":"<p><p>Corals have been used as geochemical proxies since the 1970s, playing a prominent role in paleoceanography. However, it has not been well elucidated how aqueous ions sourced from seawater are transported and precipitated in coral skeletons. There are limited foundational methods to differentiate and quantify biogenic and abiogenic effects during skeletal formation. Especially, Mg in coral skeletons show individual variations suggesting large biogenic effects. Here, we evaluated biological complexity by investigating how coral genes evolved over geologic time scales. We focused on Mg transporter and analysed five species from genus <i>Acropora</i> and three species from genus <i>Porites</i>. Mg transporter of <i>Acropora digitifera</i>, <i>Acropora hyacinthus</i>, <i>Acropora millepora</i> and <i>Porites australiensis</i> showed higher similarity to Mg transporter of vertebrates and were reported to appear on Earth during the Pleistocene. On the other hand, <i>Acropora palmata</i>, <i>Acropora tenui</i>s and <i>Porites astreoides</i> showed lower or no similarity to vertebrates, and they were reported to appear on Earth before the Pleistocene. We suggest such evolutional records can be evidence to demonstrate biological complexity of Mg transport from seawater. This might explain that Mg transport is subject to evolution and why Mg incorporated in coral skeletons tends to show strong biogenic effects compared with other elements.</p>","PeriodicalId":21525,"journal":{"name":"Royal Society Open Science","volume":"12 1","pages":"232011"},"PeriodicalIF":2.9000,"publicationDate":"2025-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11750370/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Royal Society Open Science","FirstCategoryId":"103","ListUrlMain":"https://doi.org/10.1098/rsos.232011","RegionNum":3,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
引用次数: 0

Abstract

Corals have been used as geochemical proxies since the 1970s, playing a prominent role in paleoceanography. However, it has not been well elucidated how aqueous ions sourced from seawater are transported and precipitated in coral skeletons. There are limited foundational methods to differentiate and quantify biogenic and abiogenic effects during skeletal formation. Especially, Mg in coral skeletons show individual variations suggesting large biogenic effects. Here, we evaluated biological complexity by investigating how coral genes evolved over geologic time scales. We focused on Mg transporter and analysed five species from genus Acropora and three species from genus Porites. Mg transporter of Acropora digitifera, Acropora hyacinthus, Acropora millepora and Porites australiensis showed higher similarity to Mg transporter of vertebrates and were reported to appear on Earth during the Pleistocene. On the other hand, Acropora palmata, Acropora tenuis and Porites astreoides showed lower or no similarity to vertebrates, and they were reported to appear on Earth before the Pleistocene. We suggest such evolutional records can be evidence to demonstrate biological complexity of Mg transport from seawater. This might explain that Mg transport is subject to evolution and why Mg incorporated in coral skeletons tends to show strong biogenic effects compared with other elements.

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
用生物信息学的方法解释海水中的镁是如何被纳入珊瑚骨架的。
自20世纪70年代以来,珊瑚一直被用作地球化学指标,在古海洋学中发挥着突出的作用。然而,目前还没有很好地阐明来自海水的水离子如何在珊瑚骨架中运输和沉淀。在骨骼形成过程中,区分和量化生物源和非生物源效应的基础方法有限。特别是,珊瑚骨骼中的Mg表现出个体差异,表明有很大的生物效应。在这里,我们通过研究珊瑚基因如何在地质时间尺度上进化来评估生物复杂性。以Mg转运体为研究对象,分析了5种Acropora属植物和3种Porites属植物。据报道,地球上出现于更新世的镁转运体与脊椎动物的镁转运体具有较高的相似性,其中Acropora digitalfera、Acropora hyacinthus、Acropora millepora和Porites australiensis的镁转运体与脊椎动物相似。另一方面,Acropora palmata、Acropora tenuis和Porites astreoides与脊椎动物的相似性较低或不相似,据报道它们出现在更新世之前的地球上。我们认为这些进化记录可以作为证明镁从海水中迁移的生物复杂性的证据。这可能解释了镁的运输受进化的影响,以及为什么与其他元素相比,镁在珊瑚骨骼中的结合往往表现出强烈的生物效应。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Royal Society Open Science
Royal Society Open Science Multidisciplinary-Multidisciplinary
CiteScore
6.00
自引率
0.00%
发文量
508
审稿时长
14 weeks
期刊介绍: Royal Society Open Science is a new open journal publishing high-quality original research across the entire range of science on the basis of objective peer-review. The journal covers the entire range of science and mathematics and will allow the Society to publish all the high-quality work it receives without the usual restrictions on scope, length or impact.
期刊最新文献
Desert lizards modulate nutritional responses to match seasonal biological needs. A dynamical measure of algorithmically infused visibility. Chicks of cavity-nesting birds do not 'exercise' prior to fledging. A total evidence approach justifies taxonomic splitting of the endangered Pecos gambusia into three species. Do scarcity-related cues affect the sustained attentional performance of the poor and the rich differently?
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1