Przemysław Starynowicz, Katarzyna Anna Ślepokura, Paulina Kurowska, Vasyl Kinzhybalo
{"title":"Electron density distribution in bis(guanidinium) disodium hypodiphosphate heptahydrate, (CH<sub>6</sub>N<sub>3</sub>)<sub>2</sub>Na<sub>2</sub>(P<sub>2</sub>O<sub>6</sub>)·7H<sub>2</sub>O.","authors":"Przemysław Starynowicz, Katarzyna Anna Ślepokura, Paulina Kurowska, Vasyl Kinzhybalo","doi":"10.1107/S2052520624011120","DOIUrl":null,"url":null,"abstract":"<p><p>X-ray structural analysis of bis(guanidinium) disodium hypodiphosphate heptahydrate, (CH<sub>6</sub>N<sub>3</sub>)<sub>2</sub>Na<sub>2</sub>(P<sub>2</sub>O<sub>6</sub>)·7H<sub>2</sub>O revealed close Na<sup>+</sup>...guanidinium [Na...N 3.0366 (6) Å] and water...guanidinium O-H...N [H...N 2.07 Å, O...N 3.0401 (9) Å] contacts, the nature of which is explored with the use of electron density distribution and Hirshfeld surface analysis. The crystal structure is governed by coordination interactions to Na<sup>+</sup> cations and an extensive network of hydrogen bonds, in which guanidinium cations, hypodiphosphate ions and water molecules are involved. Na<sup>+</sup> cations are in tetragonal pyramidal or octahedral environment, which was proved by continuous shape measures. From ∇<sup>2</sup>ρ(r<sub>c</sub>) and bond degree values, the character of P-P bonds are classified as shared shell or covalent bond types, whereas P-O bonds are of transit closed shell or polarized covalent types. Despite the lack of a lone electron pair on the N atom and positive charge of the guanidinium cation, the existence of an O-H...N hydrogen bond was confirmed by electron density studies.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":"135-145"},"PeriodicalIF":1.3000,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta crystallographica Section B, Structural science, crystal engineering and materials","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1107/S2052520624011120","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/23 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
X-ray structural analysis of bis(guanidinium) disodium hypodiphosphate heptahydrate, (CH6N3)2Na2(P2O6)·7H2O revealed close Na+...guanidinium [Na...N 3.0366 (6) Å] and water...guanidinium O-H...N [H...N 2.07 Å, O...N 3.0401 (9) Å] contacts, the nature of which is explored with the use of electron density distribution and Hirshfeld surface analysis. The crystal structure is governed by coordination interactions to Na+ cations and an extensive network of hydrogen bonds, in which guanidinium cations, hypodiphosphate ions and water molecules are involved. Na+ cations are in tetragonal pyramidal or octahedral environment, which was proved by continuous shape measures. From ∇2ρ(rc) and bond degree values, the character of P-P bonds are classified as shared shell or covalent bond types, whereas P-O bonds are of transit closed shell or polarized covalent types. Despite the lack of a lone electron pair on the N atom and positive charge of the guanidinium cation, the existence of an O-H...N hydrogen bond was confirmed by electron density studies.
期刊介绍:
Acta Crystallographica Section B: Structural Science, Crystal Engineering and Materials publishes scientific articles related to the structural science of compounds and materials in the widest sense. Knowledge of the arrangements of atoms, including their temporal variations and dependencies on temperature and pressure, is often the key to understanding physical and chemical phenomena and is crucial for the design of new materials and supramolecular devices. Acta Crystallographica B is the forum for the publication of such contributions. Scientific developments based on experimental studies as well as those based on theoretical approaches, including crystal-structure prediction, structure-property relations and the use of databases of crystal structures, are published.