How to: share and reuse data—challenges and solutions from predicting the impact of monoclonal antibodies & vaccines on antimicrobial resistance project

IF 8.5 1区 医学 Q1 INFECTIOUS DISEASES Clinical Microbiology and Infection Pub Date : 2025-05-01 Epub Date: 2025-01-25 DOI:10.1016/j.cmi.2025.01.024
Mariana Guedes , Almudena de la Serna Bazan , Elena Rubio-Martín , Lydia Barrera Pulido , Virginia Palomo , Alen Piljić , Quentin J. Leclerc , Emmanuel Aris , Venanzio Vella , Asta Dambrauskienė , Julie V. Robotham , Astrid Pérez , Nasreen Hassoun-Kheir , Marlieke E.A. de Kraker , Fabiana Arieti , Ruth Joanna Davis , Evelina Tacconelli , Elena Salamanca-Rivera , Jesús Rodríguez-Baño
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引用次数: 0

Abstract

Background

Data sharing accelerates scientific progress and improves evidence quality. Even though journals and funding institutions require investigators to share data, only a small part of studies made their data publicly available upon publication. The procedures necessary to share retrospective data for reuse in secondary data analysis projects can be cumbersome.

Objectives

Predicting the Impact of Monoclonal Antibodies & Vaccines on Antimicrobial Resistance is a European research project that aims to develop mathematical models and an epidemiological repository to assess the impact of vaccines and monoclonal antibodies on antimicrobial resistance (AMR). To accomplish the project aim, Work Package 3 was responsible for gathering historical anonymized individual patient datasets.

Sources

Through a systematic search we have identified 108 eligible studies for data sharing; of which eight have completed all legal requirements and shared their datasets, with data from four infectious syndromes and seven resistant pathogens. The AMR data gathered in Predicting the Impact of Monoclonal Antibodies & Vaccines on Antimicrobial Resistance project are publicly available in European Clinical Research Alliance on Infectious Disease epidemiology network platform (https://epi-net.eu/primavera/about/anonymized-individual-patient-data/).

Content

Challenges and possible solutions in data sharing activities were mapped and discussed: lack of researchers' interest in sharing data, cumbersome ethical and legal requirements, laborious data management procedures, specific requirements for public data access, insufficient training and funding.

Implications

We expect that experience gained in this project can be useful to improve data sharing; and that the datasets gathered can be used in future AMR projects.
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如何:共享和重用数据——PrIMAVeRa项目的挑战和解决方案。
背景:数据共享加速了科学进步,提高了证据质量。尽管期刊和资助机构要求研究人员分享数据,但只有一小部分研究在发表后将数据公开。共享回顾性数据以便在二级数据分析项目中重用所必需的过程可能很麻烦。目的:预测单克隆抗体和疫苗对抗菌素耐药性的影响(PrIMAVeRa)是一项欧洲研究项目,旨在开发数学模型和流行病学知识库,以评估疫苗和单克隆抗体对抗菌素耐药性(AMR)的影响。为了完成项目目标,工作包3负责收集历史匿名个体患者数据集。来源:通过系统检索,我们确定了108项符合数据共享条件的研究;其中8个国家已完成所有法律要求,并分享了它们的数据集,其中包括4种感染综合征和7种耐药病原体的数据。PrIMAVeRa项目收集的AMR数据可在欧洲传染病流行病学临床研究联盟网络平台(https://epi-net.eu/primavera/about/anonymized-individual-patient-data/)上公开获取。内容:绘制并讨论了数据共享活动中的挑战和可能的解决方案:研究人员对共享数据缺乏兴趣、繁琐的伦理和法律要求、繁琐的数据管理程序、公共数据访问的具体要求、培训和资金不足。启示:我们期望在这个项目中获得的经验可以对改善数据共享有用;收集到的数据集可以用于未来的抗菌素耐药性项目。
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来源期刊
CiteScore
25.30
自引率
2.10%
发文量
441
审稿时长
2-4 weeks
期刊介绍: Clinical Microbiology and Infection (CMI) is a monthly journal published by the European Society of Clinical Microbiology and Infectious Diseases. It focuses on peer-reviewed papers covering basic and applied research in microbiology, infectious diseases, virology, parasitology, immunology, and epidemiology as they relate to therapy and diagnostics.
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