The nature of halogen bonding: insights from interacting quantum atoms and source function studies.

IF 2.9 2区 材料科学 Q2 CHEMISTRY, MULTIDISCIPLINARY IUCrJ Pub Date : 2025-03-01 DOI:10.1107/S2052252525000363
Arianna Pisati, Alessandra Forni, Stefano Pieraccini, Maurizio Sironi
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Abstract

A detailed study of the X...N (X = I, Br) halogen bonds in complexes formed by an extended set of substituted pyridines with D-X molecules (D = X, CN) is reported here. The nature of these interactions has been investigated at different (MP2 and DFT) levels of theory through Bader's quantum theory of atoms in molecules (QTAIM) and Pendás' interacting quantum atoms (IQA) scheme, focusing on the role of the local environment (i.e. the substituent on the pyridine ring and the halogenated residue) on the halogen bond features. We found that the exchange-correlation energy represents a substantial contribution to the IQA total energy, in some cases comparable to (I2 complexes) or even dominating (ICN complexes) the electrostatic term. Meaningful information is provided by the source function, indicating that the major contribution to the electron density at the bond critical point of the X...N interaction is derived from the halogen atom, while a much lower contribution comes from the nitrogen atom, which acts as either source or sink for electron density. A relevant contribution from distal atoms, including the various electron-donor and electron-withdrawing substituents in different positions of the pyridine ring, is also determined, highlighting the non-local character of the electron density. The existence of possible relationships between binding energies, interaction energies according to IQA, and QTAIM descriptors such as delocalization indices and source function, has been inspected. In general, good correlations are only found when the local environment, external to the directly involved halogen and nitrogen atoms, plays a minor role in the interaction.

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本文报告了对一组扩展的取代吡啶与 D-X 分子(D = X,CN)形成的复合物中 X...N(X = I,Br)卤键的详细研究。通过 Bader 的分子中原子量子理论(QTAIM)和 Pendás 的量子原子相互作用(IQA)方案,在不同(MP2 和 DFT)理论水平上研究了这些相互作用的性质,重点研究了局部环境(即吡啶环上的取代基和卤化残基)对卤键特征的作用。我们发现,交换相关能对 IQA 总能的贡献很大,在某些情况下与静电项(I2 复合物)相当,甚至主导静电项(ICN 复合物)。源函数提供了有意义的信息,表明在 X...N 相互作用的键临界点上,卤原子对电子密度的贡献最大,而氮原子的贡献要小得多,它既是电子密度的源,也是电子密度的汇。此外,还确定了远端原子的相关贡献,包括吡啶环不同位置上的各种电子供体和电子吸附取代基,这凸显了电子密度的非局部性。研究人员还考察了结合能、根据 IQA 得出的相互作用能以及 QTAIM 描述因子(如析离指数和源函数)之间可能存在的关系。一般来说,只有当直接参与的卤素原子和氮原子之外的局部环境在相互作用中扮演次要角色时,才能发现良好的相关性。
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来源期刊
IUCrJ
IUCrJ CHEMISTRY, MULTIDISCIPLINARYCRYSTALLOGRAPH-CRYSTALLOGRAPHY
CiteScore
7.50
自引率
5.10%
发文量
95
审稿时长
10 weeks
期刊介绍: IUCrJ is a new fully open-access peer-reviewed journal from the International Union of Crystallography (IUCr). The journal will publish high-profile articles on all aspects of the sciences and technologies supported by the IUCr via its commissions, including emerging fields where structural results underpin the science reported in the article. Our aim is to make IUCrJ the natural home for high-quality structural science results. Chemists, biologists, physicists and material scientists will be actively encouraged to report their structural studies in IUCrJ.
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