PCMMD: A Novel Dataset of Plasma Cells to Support the Diagnosis of Multiple Myeloma.

IF 6.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Scientific Data Pub Date : 2025-01-27 DOI:10.1038/s41597-025-04459-1
Caio L B Andrade, Marcos V Ferreira, Brenno M Alencar, Jorge L S B Filho, Matheus A Guimaraes, Iarley Porto Cruz Moraes, Tiago J S Lopes, Allan S Dos Santos, Mariane M Dos Santos, Maria I C S E Silva, Izabela M D R P Rosa, Gilson C de Carvalho, Herbert H M Santos, Márcia M L Santos, Roberto Meyer, Luciana M P B Knop, Songeli M Freire, Ricardo A Rios, Tatiane N Rios
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Abstract

Multiple Myeloma (MM) is a cytogenetically heterogeneous clonal plasma cell proliferative disease whose diagnosis is supported by analyses on histological slides of bone marrow aspirate. In summary, experts use a labor-intensive methodology to compute the ratio between plasma cells and non-plasma cells. Therefore, the key aspect of the methodology is identifying these cells, which relies on the experts' attention and experience. In this work, we present a valuable dataset comprising more than 5,000 plasma and non-plasma cells, labeled by experts, along with some patient diagnostics. We also share a Deep Neural Network model, as a benchmark, trained to identify and count plasma and non-plasma cells automatically. The contributions of this work are two-fold: (i) the labeled cells can be used to train new practitioners and support continuing medical education; and (ii) the design of new methods to identify such cells, improving the results presented by our benchmark. We emphasize that our work supports the diagnosis of MM in practical scenarios and paves new ways to advance the state-of-the-art.

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PCMMD:支持多发性骨髓瘤诊断的新颖浆细胞数据集。
多发性骨髓瘤(MM)是一种细胞遗传学异质性克隆性浆细胞增生性疾病,其诊断可通过骨髓抽吸组织学切片分析得到支持。总之,专家们使用一种劳动密集型的方法来计算浆细胞和非浆细胞之间的比率。因此,该方法的关键方面是识别这些细胞,这依赖于专家的注意力和经验。在这项工作中,我们提出了一个有价值的数据集,包括5000多个血浆和非浆细胞,由专家标记,以及一些患者诊断。我们还分享了一个深度神经网络模型作为基准,该模型经过训练可以自动识别和计数血浆和非浆细胞。这项工作的贡献是双重的:(i)标记细胞可用于培训新的从业人员和支持继续医学教育;(ii)设计新的方法来识别这些细胞,改进我们的基准给出的结果。我们强调,我们的工作支持MM在实际情况下的诊断,并为推进最先进的技术铺平了新的道路。
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来源期刊
Scientific Data
Scientific Data Social Sciences-Education
CiteScore
11.20
自引率
4.10%
发文量
689
审稿时长
16 weeks
期刊介绍: Scientific Data is an open-access journal focused on data, publishing descriptions of research datasets and articles on data sharing across natural sciences, medicine, engineering, and social sciences. Its goal is to enhance the sharing and reuse of scientific data, encourage broader data sharing, and acknowledge those who share their data. The journal primarily publishes Data Descriptors, which offer detailed descriptions of research datasets, including data collection methods and technical analyses validating data quality. These descriptors aim to facilitate data reuse rather than testing hypotheses or presenting new interpretations, methods, or in-depth analyses.
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