The B Chromosome of Pseudococcus viburni: A Selfish Chromosome that Exploits Whole-Genome Meiotic Drive.

IF 2.8 2区 生物学 Q2 EVOLUTIONARY BIOLOGY Genome Biology and Evolution Pub Date : 2025-01-06 DOI:10.1093/gbe/evae257
Isabelle M Vea, Andrés G de la Filia, Kamil S Jaron, Scott E J Barlow, Marion Herbette, Andrew J Mongue, Ross Nelson, Francisco J Ruiz-Ruano, Laura Ross
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Abstract

Meiosis is generally a fair process: each chromosome has a 50% chance of being included into each gamete. However, meiosis can become aberrant with some chromosomes having a higher chance of making it into gametes than others. Yet, why and how such systems evolve remains unclear. Here, we study the unusual reproductive genetics of mealybugs, where only maternal-origin chromosomes are included in gametes during male meiosis, while paternal chromosomes are eliminated. One species-Pseudococcus viburni-has a segregating B chromosome that drives by escaping paternal genome elimination. We present whole genome and gene expression data from lines with and without B chromosomes. We identify B-linked sequences including 204 protein-coding genes and a satellite repeat that makes up a significant proportion of the chromosome. The few paralogs between the B and the core genome are distributed throughout the genome, arguing against a simple, or at least recent, chromosomal duplication of one of the autosomes to create the B. We do, however, find one 373 kb region containing 146 genes that appears to be a recent translocation. Finally, we show that while many B-linked genes are expressed during meiosis, most of these are encoded on the recently translocated region. Only a small number of B-exclusive genes are expressed during meiosis. Of these, only one was overexpressed during male meiosis, which is when the drive occurs: an acetyltransferase involved in H3K56Ac, which has a putative role in meiosis and is, therefore, a promising candidate for further studies.

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弧菌假球菌B染色体:利用全基因组减数分裂驱动的自私染色体。
减数分裂通常是一个公平的过程:每条染色体有50%的机会被包含到每个配子中。然而,减数分裂可能会变得异常,一些染色体比其他染色体有更高的机会进入配子。然而,这些系统为何以及如何进化仍不清楚。在这里,我们研究了粉蚧不寻常的生殖遗传学,在雄性减数分裂过程中,配子中只有母系染色体,而父系染色体被消除。其中一种——弧菌假球菌——有一条分离的B染色体,它通过逃避父系基因组消除来驱动。我们展示了有和没有B染色体的细胞系的全基因组和基因表达数据。我们鉴定了b链序列,包括204个蛋白质编码基因和一个卫星重复序列,构成了染色体的很大一部分。B和核心基因组之间的少数相似点分布在整个基因组中,这反驳了一个简单的,或至少是最近的,常染色体之一的染色体复制创造了B。然而,我们确实发现了一个373 kb的区域,包含146个基因,似乎是最近的易位。最后,我们表明,虽然许多b链基因在减数分裂期间表达,但其中大多数是在最近易位区域编码的。在减数分裂过程中只有少数b -排他基因表达。其中,只有一个在雄性减数分裂期间过度表达,这是驱动发生的时候:一个与H3K56Ac有关的乙酰转移酶,它在减数分裂中有推测的作用,因此是一个有希望进一步研究的候选基因。
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来源期刊
Genome Biology and Evolution
Genome Biology and Evolution EVOLUTIONARY BIOLOGY-GENETICS & HEREDITY
CiteScore
5.80
自引率
6.10%
发文量
169
审稿时长
1 months
期刊介绍: About the journal Genome Biology and Evolution (GBE) publishes leading original research at the interface between evolutionary biology and genomics. Papers considered for publication report novel evolutionary findings that concern natural genome diversity, population genomics, the structure, function, organisation and expression of genomes, comparative genomics, proteomics, and environmental genomic interactions. Major evolutionary insights from the fields of computational biology, structural biology, developmental biology, and cell biology are also considered, as are theoretical advances in the field of genome evolution. GBE’s scope embraces genome-wide evolutionary investigations at all taxonomic levels and for all forms of life — within populations or across domains. Its aims are to further the understanding of genomes in their evolutionary context and further the understanding of evolution from a genome-wide perspective.
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