A simple model for the analysis of epidemics based on hospitalization data

IF 1.8 4区 数学 Q2 BIOLOGY Mathematical Biosciences Pub Date : 2025-01-26 DOI:10.1016/j.mbs.2025.109380
Katelyn Plaisier Leisman , Shinhae Park , Sarah Simpson , Zoi Rapti
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Abstract

An epidemiological model with a minimal number of parameters is introduced and its structural and practical identifiabity is investigated both analytically and numerically. The model is useful when a high percentage of unreported cases is suspected, hence only hospitalization data are used to fit the model parameters and calculate the basic reproductive number R0 and the effective reproductive number Re. As a case study, the model is used to study the initial surge and the Omicron wave of the COVID-19 epidemic in Belgium. It was found that the reported cases largely underestimate the actual cases, and the estimated values of R0 are consistent with other studies. The exact number of people initially in each epidemiological class is also considered unknown and was estimated directly and not considered as additional parameters to be fitted. Furthermore, the parameter fitting was performed with two different available data sets, in order to improve confidence. The methodology presented here can be easily modified to study outbreaks of diseases for which little information on confirmed cases is known a priori or when the available information is largely unreliable.
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基于住院数据的流行病分析的简单模型。
介绍了一种具有最小参数数的流行病学模型,并从分析和数值两方面对其结构和实际识别性进行了研究。该模型适用于疑似未报告病例比例较高的情况,因此仅使用住院数据拟合模型参数,计算基本繁殖数R0和有效繁殖数Re。作为案例研究,该模型用于研究比利时新冠肺炎疫情的初始激增和欧米克隆波。研究发现,报告病例在很大程度上低估了实际病例,R0的估计值与其他研究一致。每个流行病学类别最初的确切人数也被认为是未知的,是直接估计的,而不是作为拟合的附加参数。此外,对两个不同的可用数据集进行参数拟合,以提高置信度。这里提出的方法可以很容易地加以修改,以研究先验的确诊病例信息很少或现有信息在很大程度上不可靠的疾病暴发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Mathematical Biosciences
Mathematical Biosciences 生物-生物学
CiteScore
7.50
自引率
2.30%
发文量
67
审稿时长
18 days
期刊介绍: Mathematical Biosciences publishes work providing new concepts or new understanding of biological systems using mathematical models, or methodological articles likely to find application to multiple biological systems. Papers are expected to present a major research finding of broad significance for the biological sciences, or mathematical biology. Mathematical Biosciences welcomes original research articles, letters, reviews and perspectives.
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