Exploring prognosis and therapeutic strategies for HBV-HCC patients based on disulfidptosis-related genes.

IF 2.8 3区 生物学 Q2 GENETICS & HEREDITY Frontiers in Genetics Pub Date : 2025-01-15 eCollection Date: 2024-01-01 DOI:10.3389/fgene.2024.1522484
Chuankuo Zhang, Xing Zhang, Shengjie Dai, Wenjun Yang
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Abstract

Background: Hepatocellular carcinoma (HCC) accounts for over 80% of primary liver cancers and is the third leading cause of cancer-related deaths worldwide. Hepatitis B virus (HBV) infection is the primary etiological factor. Disulfidptosis is a newly discovered form of regulated cell death. This study aims to develop a novel HBV-HCC prognostic signature related to disulfidptosis and explore potential therapeutic approaches through risk stratification based on disulfidptosis.

Methods: Transcriptomic data from HBV-HCC patients were analyzed to identify BHDRGs. A prognostic model was established and validated using machine learning, with internal datasets and external datasets for verification. We then performed immune cell infiltration analysis, tumor microenvironment (TME) analysis, and immunotherapy-related analysis based on the prognostic signature. Besides, RT-qPCR and immunohistochemistry were conducted.

Results: A prognostic model was constructed using five genes (DLAT, STC2, POF1B, S100A9, and CPS1). A corresponding prognostic nomogram was developed based on riskScores, age, stage. Stratification by median risk score revealed a significant correlation between the prognostic signature and TME, tumor immune cell infiltration, immunotherapy efficacy, and drug sensitivity. The results of the experiments indicate that DLAT expression is higher in tumor tissues compared to adjacent tissues. DLAT expression is higher in HBV-HCC tumor tissues compared to normal tissues.

Conclusion: This study stratifies HBV-HCC patients into distinct subgroups based on BHDRGs, establishing a prognostic model with significant implications for prognosis assessment, TME remodeling, and personalized therapy in HBV-HCC patients.

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基于二硫塌陷相关基因探讨HBV-HCC患者的预后及治疗策略。
背景:肝细胞癌(HCC)占原发性肝癌的80%以上,是全球癌症相关死亡的第三大原因。乙型肝炎病毒(HBV)感染是主要病因。双曲下垂是一种新发现的细胞死亡形式。本研究旨在开发一种新的与双睑下垂相关的HBV-HCC预后特征,并通过基于双睑下垂的风险分层探索潜在的治疗方法。方法:分析HBV-HCC患者的转录组学数据以鉴定BHDRGs。使用机器学习建立并验证了预测模型,并使用内部数据集和外部数据集进行验证。然后我们进行免疫细胞浸润分析、肿瘤微环境(TME)分析和基于预后特征的免疫治疗相关分析。同时进行RT-qPCR和免疫组织化学检测。结果:构建了5个基因(DLAT、STC2、POF1B、S100A9和CPS1)的预后模型。根据风险评分、年龄、分期制定相应的预后nomogram。中位风险评分分层显示预后特征与TME、肿瘤免疫细胞浸润、免疫治疗疗效和药物敏感性之间存在显著相关性。实验结果表明,肿瘤组织中DLAT的表达高于邻近组织。与正常组织相比,DLAT在HBV-HCC肿瘤组织中的表达更高。结论:本研究基于BHDRGs将HBV-HCC患者划分为不同的亚组,建立了HBV-HCC患者预后评估、TME重塑及个性化治疗的预后模型。
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来源期刊
Frontiers in Genetics
Frontiers in Genetics Biochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
5.50
自引率
8.10%
发文量
3491
审稿时长
14 weeks
期刊介绍: Frontiers in Genetics publishes rigorously peer-reviewed research on genes and genomes relating to all the domains of life, from humans to plants to livestock and other model organisms. Led by an outstanding Editorial Board of the world’s leading experts, this multidisciplinary, open-access journal is at the forefront of communicating cutting-edge research to researchers, academics, clinicians, policy makers and the public. The study of inheritance and the impact of the genome on various biological processes is well documented. However, the majority of discoveries are still to come. A new era is seeing major developments in the function and variability of the genome, the use of genetic and genomic tools and the analysis of the genetic basis of various biological phenomena.
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