clustur: an R package for clustering features using sparse distance matrices.

IF 0.7 Q4 MICROBIOLOGY Microbiology Resource Announcements Pub Date : 2025-01-30 DOI:10.1128/mra.01238-24
Gregory Johnson, Sarah L Westcott, Patrick D Schloss
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Abstract

The clustur R package implements the de novo clustering algorithms found in the mothur software package for assigning 16S rRNA gene sequences to operational taxonomic units (OTUs). Making these algorithms accessible through the R ecosystem will foster their further development, broader application, and integration within other R packages.

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