clustur: an R package for clustering features using sparse distance matrices.

IF 0.7 Q4 MICROBIOLOGY Microbiology Resource Announcements Pub Date : 2025-03-11 Epub Date: 2025-01-30 DOI:10.1128/mra.01238-24
Gregory Johnson, Sarah L Westcott, Patrick D Schloss
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引用次数: 0

Abstract

The clustur R package implements the de novo clustering algorithms found in the mothur software package for assigning 16S rRNA gene sequences to operational taxonomic units (OTUs). Making these algorithms accessible through the R ecosystem will foster their further development, broader application, and integration within other R packages.

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cluster:一个R包,用于使用稀疏距离矩阵聚类特征。
cluster R包实现了母软件包中的从头聚类算法,用于将16S rRNA基因序列分配给操作分类单元(operational taxonomic units, otu)。通过R生态系统访问这些算法将促进它们的进一步开发、更广泛的应用以及与其他R包的集成。
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CiteScore
1.50
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12.50%
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837
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