A polyphasic method for the characterization of epiphytic diatoms growing on Gelidium corneum

IF 1.9 Q2 MULTIDISCIPLINARY SCIENCES MethodsX Pub Date : 2025-01-28 DOI:10.1016/j.mex.2025.103188
María Borrego-Ramos , Raquel Viso , Saúl Blanco , Begoña Sánchez-Astráin , Camino F. de la Hoz , José A. Juanes
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Abstract

Epiphytic diatoms associated with marine macroalgae play vital ecological roles in nutrient cycling and primary production, yet their study remains limited due to the lack of standardized methodologies. This study focuses on diatom communities growing on Gelidium corneum, a key red alga in the Cantabrian coast (Spain). Samples were collected from two depths along the northern coast of Spain and processed using both morphological and molecular approaches. Morphological analysis involved diatom frustule preparation using hydrogen peroxide digestion, acid treatments, and permanent slide mounting, enabling identification through light microscopy. Molecular analysis employed DNA extraction and rbcL marker-based metabarcoding, allowing detailed taxonomic characterization. Results highlight the efficacy of combining morphological and molecular techniques to overcome the limitations of either approach individually. By standardizing procedures, we enhance the reproducibility and comparability of studies focused on diatom epiphytes. Our results highlight the ecological significance of diatom-macroalgal interactions and provide a framework for future investigations into these essential but underexplored communities.
  • A polyphasic method was developed for studying epiphytic diatoms on Gelidium corneum, combining morphological and molecular tools.
  • The approach overcomes challenges in diatom characterization, including intricate host morphology and cryptic species identification.
  • Standardized protocols enhance reproducibility and offer insights into diatom-macroalgal ecological interactions.

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角质层上生长的附生硅藻的多相表征方法
与海洋巨藻相关的附生硅藻在养分循环和初级生产中发挥着重要的生态作用,但由于缺乏标准化的研究方法,对其的研究仍然有限。本研究的重点是生长在角胶藻上的硅藻群落,角胶藻是坎塔布连海岸(西班牙)的一种关键红藻。样本从西班牙北部海岸的两个深度收集,并使用形态学和分子方法进行处理。形态学分析包括使用过氧化氢消化、酸处理和永久载玻片安装硅藻支架制备,以便通过光学显微镜进行鉴定。分子分析采用DNA提取和基于rbcL标记的元条形码,允许详细的分类表征。结果强调了形态学和分子技术相结合的有效性,以克服单独的任何一种方法的局限性。通过标准化程序,我们提高了硅藻附生植物研究的可重复性和可比性。我们的研究结果强调了硅藻-巨藻相互作用的生态意义,并为未来研究这些重要但未被充分探索的群落提供了一个框架。•建立了一种形态学和分子相结合的多相方法研究角质层附生硅藻。•该方法克服了硅藻表征的挑战,包括复杂的宿主形态和隐物种鉴定。•标准化协议提高了可重复性,并提供了对硅藻-大藻生态相互作用的见解。
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来源期刊
MethodsX
MethodsX Health Professions-Medical Laboratory Technology
CiteScore
3.60
自引率
5.30%
发文量
314
审稿时长
7 weeks
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