The metal-ligand local mode as a descriptor for catalytic activity

IF 2.6 3区 化学 Q2 CHEMISTRY, INORGANIC & NUCLEAR Polyhedron Pub Date : 2025-02-01 DOI:10.1016/j.poly.2024.117336
Abhilash Patra , Pallavi Sarkar , Shaama Mallikarjun Sharada
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Abstract

We examine whether local metal-ligand vibrational modes are suitable descriptors for catalytic activity of [Cu2O2]2+ complexes towards CH4 hydroxylation. The objective is to construct an active site-specific structure–activity relationship that can predict the activity for a wide range of ligand backbones. To this end, we choose N-donor ligands spanning substituted imidazoles, amines, diamines, pyridines, thiazoles, and mixed systems. We construct both linear models (or linear free energy relationships, LFERs) as well as non-linear, regression-based machine learning models using gradient boosting regression (GBR) and eXtreme Gradient Boosting (XGBoost). The LFER yields weak correlations between the descriptors and the barrier, indicating that the underlying relationship is likely not a linear one. On the other hand, GBR accurately predict barriers to within 5 kJ mol−1 and yields a relationship that is transferable across several ligand backbones. The local modes constituting the active site, therefore, are suitable descriptors for catalytic activity.

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金属配体局部模式作为催化活性的描述符
我们研究了局部金属配体振动模式是否适合描述[Cu2O2]2+配合物对CH4羟基化的催化活性。目的是建立一个活性位点特异性的构效关系,以预测大范围配体骨架的活性。为此,我们选择了n -供体配体,涵盖取代咪唑、胺、二胺、吡啶、噻唑和混合体系。我们使用梯度增强回归(GBR)和极限梯度增强(XGBoost)构建线性模型(或线性自由能关系,LFERs)以及非线性、基于回归的机器学习模型。LFER在描述符和势垒之间产生弱相关性,表明潜在的关系可能不是线性的。另一方面,GBR准确地预测了5 kJ mol−1以内的势垒,并产生了在几个配体主干之间可转移的关系。因此,构成活性位点的局部模式是催化活性的合适描述符。
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来源期刊
Polyhedron
Polyhedron 化学-晶体学
CiteScore
4.90
自引率
7.70%
发文量
515
审稿时长
2 months
期刊介绍: Polyhedron publishes original, fundamental, experimental and theoretical work of the highest quality in all the major areas of inorganic chemistry. This includes synthetic chemistry, coordination chemistry, organometallic chemistry, bioinorganic chemistry, and solid-state and materials chemistry. Papers should be significant pieces of work, and all new compounds must be appropriately characterized. The inclusion of single-crystal X-ray structural data is strongly encouraged, but papers reporting only the X-ray structure determination of a single compound will usually not be considered. Papers on solid-state or materials chemistry will be expected to have a significant molecular chemistry component (such as the synthesis and characterization of the molecular precursors and/or a systematic study of the use of different precursors or reaction conditions) or demonstrate a cutting-edge application (for example inorganic materials for energy applications). Papers dealing only with stability constants are not considered.
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