Application of ATR-FTIR spectroscopy and multivariate statistical analysis in cancer diagnosis

IF 3.7 4区 医学 Q3 BIOCHEMICAL RESEARCH METHODS SLAS Technology Pub Date : 2025-04-01 Epub Date: 2025-02-01 DOI:10.1016/j.slast.2025.100253
Ao Song , Wanli Yang , Jun Wang , Yisa Cai , Lizheng Cai , Nan Pang , Ruihua Yu , Zhikun Liu , Chao Yang , Feng Jiang
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Abstract

Lung cancer is one of the most prevalent and lethal malignant tumors worldwide. Currently, clinical diagnosis primarily relies on chest X-ray examinations, histopathological analysis, and the detection of tumor markers in blood. However, each of these methods has inherent limitations. The current study aims to explore novel diagnostic approaches for lung cancer by employing attenuated total reflection-Fourier transform infrared (ATR-FTIR) spectroscopy in conjunction with multiple machine learning models. Fourier transform infrared spectroscopy can detect subtle differences in the material structures that reflect the carcinogenic process between lung cancer tissues and normal tissues. By applying principal component analysis (PCA) and partial least squares discriminant analysis (PLS-DA) to analyze infrared spectral data, these subtle differences can be amplified. The study revealed that the combination of spectral bands within the 3500–3000 cm-1 and 1600–1500 cm-1 ranges is particularly significant for differentiating between the two groups. Three classification models—Support Vector Machine (SVM), k-Nearest Neighbor (kNN), and Linear Discriminant Analysis (LDA)—were constructed for spectral analysis of various band combinations. The results indicated that in detecting lung cancer samples, the combination of the 3500–3000 cm-1 and 1600–1500 cm-1 bands offers significant advantages. The analysis of the receiver operating characteristic (ROC) curve demonstrated that the area under the curve (AUC) exceeded 0.95 for all models, with the LDA model achieving an accuracy rate of 99.4% in identifying lung cancer patients compared to healthy individuals. The findings suggest that the integration of ATR-FTIR spectroscopy with multiple machine learning models represents a promising auxiliary diagnostic method for clinical lung cancer diagnosis, enabling detection at the molecular level.
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ATR-FTIR光谱及多元统计分析在癌症诊断中的应用。
肺癌是世界上最常见、最致命的恶性肿瘤之一。目前,临床诊断主要依靠胸部x线检查、组织病理学分析和血液中肿瘤标志物的检测。然而,每种方法都有其固有的局限性。目前的研究旨在通过使用衰减全反射-傅里叶变换红外(ATR-FTIR)光谱与多种机器学习模型相结合,探索肺癌的新诊断方法。傅里叶变换红外光谱可以检测反映肺癌组织与正常组织癌变过程的物质结构的细微差异。通过应用主成分分析(PCA)和偏最小二乘判别分析(PLS-DA)对红外光谱数据进行分析,可以放大这些细微的差异。研究发现,3500-3000 cm-1和1600-1500 cm-1范围内的光谱波段组合对于区分两组具有特别重要的意义。构建支持向量机(SVM)、k近邻(kNN)和线性判别分析(LDA)三种分类模型,对不同波段组合进行光谱分析。结果表明,在检测肺癌样本时,3500 ~ 3000 cm-1波段与1600 ~ 1500 cm-1波段组合具有显著优势。受试者工作特征(ROC)曲线分析表明,所有模型的曲线下面积(AUC)均超过0.95,LDA模型与健康个体相比识别肺癌患者的准确率达到99.4%。研究结果表明,ATR-FTIR光谱与多种机器学习模型的集成代表了一种有前途的辅助诊断方法,可用于临床肺癌诊断,实现分子水平的检测。
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来源期刊
SLAS Technology
SLAS Technology Computer Science-Computer Science Applications
CiteScore
6.30
自引率
7.40%
发文量
47
审稿时长
106 days
期刊介绍: SLAS Technology emphasizes scientific and technical advances that enable and improve life sciences research and development; drug-delivery; diagnostics; biomedical and molecular imaging; and personalized and precision medicine. This includes high-throughput and other laboratory automation technologies; micro/nanotechnologies; analytical, separation and quantitative techniques; synthetic chemistry and biology; informatics (data analysis, statistics, bio, genomic and chemoinformatics); and more.
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