{"title":"Fused LassoNet: Sequential feature selection for spectral data with neural networks","authors":"Chaeyun Yeo , Namjoon Suh , Younghoon Kim","doi":"10.1016/j.chemolab.2024.105315","DOIUrl":null,"url":null,"abstract":"<div><div>Feature selection for high-dimensional spectral data is critical to improve the accuracy and interpretability of chemometric models. Various methods for feature selection have been introduced in chemometrics; however, achieving explainable sequential feature selection while conducting nonlinear classification simultaneously remains challenging. To address the challenge, this study proposes a fused least absolute shrinkage and selection operator network (LassoNet) that integrates the regularization principles of both the LassoNet and fused Lasso within the framework of a neural network. Further, the fused Lasso method facilitates continuous feature selection by considering the sequence between features, whereas LassoNet method enables nonlinear modeling using neural networks. We solve the fused LassoNet problem with proximal gradient descent, and the optimality of the proximal operator is mathematically proved. This study analyzes the performances of Lasso, fused Lasso, LassoNet, and fused LassoNet in classifying two groups using nine spectral datasets. The fused LassoNet demonstrates superior performance in terms of classification accuracy and sequential feature selection. These results demonstrate the proposed method enhances the predictive accuracy and interpretability of chemometric models using spectral data.</div></div>","PeriodicalId":9774,"journal":{"name":"Chemometrics and Intelligent Laboratory Systems","volume":"257 ","pages":"Article 105315"},"PeriodicalIF":3.7000,"publicationDate":"2025-01-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chemometrics and Intelligent Laboratory Systems","FirstCategoryId":"94","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169743924002557","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"AUTOMATION & CONTROL SYSTEMS","Score":null,"Total":0}
引用次数: 0
Abstract
Feature selection for high-dimensional spectral data is critical to improve the accuracy and interpretability of chemometric models. Various methods for feature selection have been introduced in chemometrics; however, achieving explainable sequential feature selection while conducting nonlinear classification simultaneously remains challenging. To address the challenge, this study proposes a fused least absolute shrinkage and selection operator network (LassoNet) that integrates the regularization principles of both the LassoNet and fused Lasso within the framework of a neural network. Further, the fused Lasso method facilitates continuous feature selection by considering the sequence between features, whereas LassoNet method enables nonlinear modeling using neural networks. We solve the fused LassoNet problem with proximal gradient descent, and the optimality of the proximal operator is mathematically proved. This study analyzes the performances of Lasso, fused Lasso, LassoNet, and fused LassoNet in classifying two groups using nine spectral datasets. The fused LassoNet demonstrates superior performance in terms of classification accuracy and sequential feature selection. These results demonstrate the proposed method enhances the predictive accuracy and interpretability of chemometric models using spectral data.
期刊介绍:
Chemometrics and Intelligent Laboratory Systems publishes original research papers, short communications, reviews, tutorials and Original Software Publications reporting on development of novel statistical, mathematical, or computer techniques in Chemistry and related disciplines.
Chemometrics is the chemical discipline that uses mathematical and statistical methods to design or select optimal procedures and experiments, and to provide maximum chemical information by analysing chemical data.
The journal deals with the following topics:
1) Development of new statistical, mathematical and chemometrical methods for Chemistry and related fields (Environmental Chemistry, Biochemistry, Toxicology, System Biology, -Omics, etc.)
2) Novel applications of chemometrics to all branches of Chemistry and related fields (typical domains of interest are: process data analysis, experimental design, data mining, signal processing, supervised modelling, decision making, robust statistics, mixture analysis, multivariate calibration etc.) Routine applications of established chemometrical techniques will not be considered.
3) Development of new software that provides novel tools or truly advances the use of chemometrical methods.
4) Well characterized data sets to test performance for the new methods and software.
The journal complies with International Committee of Medical Journal Editors'' Uniform requirements for manuscripts.