{"title":"Assessment of density functional theory methods for the [FeFe]-hydrogenases-inspired molecular catalysts","authors":"Siyao Qiu , Aimin Yu , Chenghua Sun","doi":"10.1016/j.cplett.2024.141805","DOIUrl":null,"url":null,"abstract":"<div><div>Enzymes, as the result from natural evolution, have greatly inspired chemists to design high-performance catalysts for various reactions. For such design, theoretical calculations under the scheme of density functional theory have been extensively used, but the quality strongly depends on the chosen functional. Herein, we evaluated the reliability of six functionals, including BP86, B3LYP, PBE, PBE0, TPSS and TPSSh, for theoretical investigation of [FeFe]-hydrogenases-based catalysts. By comparing with experimental data, pure functionals, especially PBE functional, showed the best performance in terms of redox potential calculation, with R-square of 0.95. Also, PBE functional showed slightly better in predicting geometry of [FeFe] molecular catalysts than the others. This assessment supports PBE functional to be widely used in predicting both geometry and energy for [FeFe]-hydrogenases-inspired molecular catalysts.</div></div>","PeriodicalId":273,"journal":{"name":"Chemical Physics Letters","volume":"860 ","pages":"Article 141805"},"PeriodicalIF":2.8000,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chemical Physics Letters","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0009261424007474","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Enzymes, as the result from natural evolution, have greatly inspired chemists to design high-performance catalysts for various reactions. For such design, theoretical calculations under the scheme of density functional theory have been extensively used, but the quality strongly depends on the chosen functional. Herein, we evaluated the reliability of six functionals, including BP86, B3LYP, PBE, PBE0, TPSS and TPSSh, for theoretical investigation of [FeFe]-hydrogenases-based catalysts. By comparing with experimental data, pure functionals, especially PBE functional, showed the best performance in terms of redox potential calculation, with R-square of 0.95. Also, PBE functional showed slightly better in predicting geometry of [FeFe] molecular catalysts than the others. This assessment supports PBE functional to be widely used in predicting both geometry and energy for [FeFe]-hydrogenases-inspired molecular catalysts.
期刊介绍:
Chemical Physics Letters has an open access mirror journal, Chemical Physics Letters: X, sharing the same aims and scope, editorial team, submission system and rigorous peer review.
Chemical Physics Letters publishes brief reports on molecules, interfaces, condensed phases, nanomaterials and nanostructures, polymers, biomolecular systems, and energy conversion and storage.
Criteria for publication are quality, urgency and impact. Further, experimental results reported in the journal have direct relevance for theory, and theoretical developments or non-routine computations relate directly to experiment. Manuscripts must satisfy these criteria and should not be minor extensions of previous work.