Assessment of density functional theory methods for the [FeFe]-hydrogenases-inspired molecular catalysts

IF 3.1 3区 化学 Q3 CHEMISTRY, PHYSICAL Chemical Physics Letters Pub Date : 2025-02-01 Epub Date: 2024-12-06 DOI:10.1016/j.cplett.2024.141805
Siyao Qiu , Aimin Yu , Chenghua Sun
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Abstract

Enzymes, as the result from natural evolution, have greatly inspired chemists to design high-performance catalysts for various reactions. For such design, theoretical calculations under the scheme of density functional theory have been extensively used, but the quality strongly depends on the chosen functional. Herein, we evaluated the reliability of six functionals, including BP86, B3LYP, PBE, PBE0, TPSS and TPSSh, for theoretical investigation of [FeFe]-hydrogenases-based catalysts. By comparing with experimental data, pure functionals, especially PBE functional, showed the best performance in terms of redox potential calculation, with R-square of 0.95. Also, PBE functional showed slightly better in predicting geometry of [FeFe] molecular catalysts than the others. This assessment supports PBE functional to be widely used in predicting both geometry and energy for [FeFe]-hydrogenases-inspired molecular catalysts.

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[FeFe]-氢化酶激发分子催化剂的密度泛函理论方法评价
酶作为自然进化的产物,极大地启发了化学家们为各种反应设计高性能催化剂。对于这种设计,密度泛函理论方案下的理论计算已被广泛使用,但质量很大程度上取决于所选择的泛函。本文对BP86、B3LYP、PBE、PBE0、TPSS和TPSSh六个官能团在[FeFe]-氢化酶催化剂理论研究中的可靠性进行了评价。与实验数据比较,纯泛函,尤其是PBE泛函在计算氧化还原电位方面表现最好,其r平方为0.95。此外,PBE函数在预测[FeFe]分子催化剂的几何形状方面也表现出较好的效果。这一评价支持了PBE功能在预测[FeFe]-氢化酶激发的分子催化剂的几何和能量方面的广泛应用。
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来源期刊
Chemical Physics Letters
Chemical Physics Letters 化学-物理:原子、分子和化学物理
CiteScore
5.70
自引率
3.60%
发文量
798
审稿时长
33 days
期刊介绍: Chemical Physics Letters has an open access mirror journal, Chemical Physics Letters: X, sharing the same aims and scope, editorial team, submission system and rigorous peer review. Chemical Physics Letters publishes brief reports on molecules, interfaces, condensed phases, nanomaterials and nanostructures, polymers, biomolecular systems, and energy conversion and storage. Criteria for publication are quality, urgency and impact. Further, experimental results reported in the journal have direct relevance for theory, and theoretical developments or non-routine computations relate directly to experiment. Manuscripts must satisfy these criteria and should not be minor extensions of previous work.
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