Gianni S.S. Liveraro , Maria E.S. Takahashi , Fabiana Lascala , Luiz R. Lopes , Nelson A. Andreollo , Maria C.S. Mendes , Jun Takahashi , José B.C. Carvalheira
{"title":"Improving resectable gastric cancer prognosis prediction: A machine learning analysis combining clinical features and body composition radiomics","authors":"Gianni S.S. Liveraro , Maria E.S. Takahashi , Fabiana Lascala , Luiz R. Lopes , Nelson A. Andreollo , Maria C.S. Mendes , Jun Takahashi , José B.C. Carvalheira","doi":"10.1016/j.imu.2024.101608","DOIUrl":null,"url":null,"abstract":"<div><div>We evaluate the significance of body composition radiomics in predicting outcomes for resectable gastric cancer (GC) patients, as these parameters can enhance optimal surveillance strategies and risk-stratification models. Automated segmentation using deep learning algorithms was employed on CT images to analyze body composition in 276 GC patients, retrospectively recruited from the Clinical Hospital of the University of Campinas. Radiomics features of skeletal muscle (SM), visceral adipose tissue (VAT), and subcutaneous adipose tissue (SAT) were calculated. Body composition radiomics were integrated with clinicopathological factors using machine learning (ML) algorithms trained for patient outcome prediction. We compared results using Random Forest, Logistic Regression and Boosted Decision Tree algorithms. To identify the relevant features for the prognosis, recursive feature inclusion (RFI) was performed using SHAP Importance ranking. Our study uncovered novel body composition radiomic features that enhance patient prognosis, particularly the 90th percentile radiodensity value (HU) for SM and VAT. The ML model output also refined pathological staging: Stage II patients with a higher predicted mortality risk by the model had overall survival (OS) similar to Stage III patients, while Stage III patients with lower predicted risk showed OS comparable to Stage II. This approach demonstrates that the integration of clinical and radiomic features enhances the accuracy of pathological staging and offers more detailed information to refine treatment strategies for gastric cancer patients. Skeletal muscle and visceral adipose tissue radiodensity percentiles emerged as crucial determinants of patient outcomes.</div></div>","PeriodicalId":13953,"journal":{"name":"Informatics in Medicine Unlocked","volume":"52 ","pages":"Article 101608"},"PeriodicalIF":0.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Informatics in Medicine Unlocked","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2352914824001655","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Medicine","Score":null,"Total":0}
引用次数: 0
Abstract
We evaluate the significance of body composition radiomics in predicting outcomes for resectable gastric cancer (GC) patients, as these parameters can enhance optimal surveillance strategies and risk-stratification models. Automated segmentation using deep learning algorithms was employed on CT images to analyze body composition in 276 GC patients, retrospectively recruited from the Clinical Hospital of the University of Campinas. Radiomics features of skeletal muscle (SM), visceral adipose tissue (VAT), and subcutaneous adipose tissue (SAT) were calculated. Body composition radiomics were integrated with clinicopathological factors using machine learning (ML) algorithms trained for patient outcome prediction. We compared results using Random Forest, Logistic Regression and Boosted Decision Tree algorithms. To identify the relevant features for the prognosis, recursive feature inclusion (RFI) was performed using SHAP Importance ranking. Our study uncovered novel body composition radiomic features that enhance patient prognosis, particularly the 90th percentile radiodensity value (HU) for SM and VAT. The ML model output also refined pathological staging: Stage II patients with a higher predicted mortality risk by the model had overall survival (OS) similar to Stage III patients, while Stage III patients with lower predicted risk showed OS comparable to Stage II. This approach demonstrates that the integration of clinical and radiomic features enhances the accuracy of pathological staging and offers more detailed information to refine treatment strategies for gastric cancer patients. Skeletal muscle and visceral adipose tissue radiodensity percentiles emerged as crucial determinants of patient outcomes.
我们评估了身体成分放射组学在预测可切除胃癌(GC)患者预后方面的意义,因为这些参数可以增强最佳监控策略和风险分层模型。利用深度学习算法对 CT 图像进行了自动分割,以分析从坎皮纳斯大学临床医院回顾性招募的 276 名 GC 患者的身体成分。计算了骨骼肌(SM)、内脏脂肪组织(VAT)和皮下脂肪组织(SAT)的放射组学特征。利用机器学习(ML)算法将身体成分放射组学与临床病理因素整合在一起,对患者的预后进行预测。我们比较了随机森林算法、逻辑回归算法和提升决策树算法的结果。为了识别与预后相关的特征,我们使用 SHAP 重要性排序法进行了递归特征包含(RFI)。我们的研究发现了可增强患者预后的新型身体成分放射学特征,尤其是 SM 和 VAT 的第 90 百分位放射密度值(HU)。ML 模型输出还完善了病理分期:模型预测死亡风险较高的 II 期患者的总生存期(OS)与 III 期患者相似,而预测风险较低的 III 期患者的 OS 与 II 期患者相当。这种方法表明,整合临床和放射学特征可提高病理分期的准确性,并为完善胃癌患者的治疗策略提供更详细的信息。骨骼肌和内脏脂肪组织放射密度百分位数是决定患者预后的关键因素。
期刊介绍:
Informatics in Medicine Unlocked (IMU) is an international gold open access journal covering a broad spectrum of topics within medical informatics, including (but not limited to) papers focusing on imaging, pathology, teledermatology, public health, ophthalmological, nursing and translational medicine informatics. The full papers that are published in the journal are accessible to all who visit the website.