Microalgae lipid membrane models: A computational biophysics characterization

IF 4.5 2区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Algal Research-Biomass Biofuels and Bioproducts Pub Date : 2025-01-01 Epub Date: 2024-12-24 DOI:10.1016/j.algal.2024.103884
Hugo A.L. Filipe, André F. Moreira, Sónia P. Miguel, Paula Coutinho
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Abstract

Microalgae are photosynthetic organisms that are attracting considerable attention for their potential applications in biotechnology and environmental sciences. There is a growing interest in utilizing microalgae biomass to produce nutraceutical and pharmaceutical products. Microalgae lipid membranes play a critical role in various biological functions, being at the forefront of research in fundamental biology and applied biotechnology. Thus, computational lipid bilayer models provide a powerful toolkit for unravelling the complexities of these membranes at an atomic level, providing insights that are crucial for advancing our knowledge in both fundamental biological processes and applied biotechnological developments. The objective of the present work was to develop computational lipid bilayer models to characterize the behaviour of membranes of different microalgae species. By comparing these models, we seek to identify the key factors that contribute to membrane stability and functionality, which could be useful for optimizing microalgae-based applications, namely to assess the interaction of drugs with microalgae lipid membranes. In this way, lipid bilayer models mimicking the outer lipid membrane of five microalgae species, like freshwater Chlorella vulgaris, Chlamydomonas reinhardtii and Scenedesmus sp., and the marine Nannochloropsis sp. and Schizochytrium limacinum SR-21 were developed. A computational biophysics characterization was employed to address different membrane properties, such as area/lipid, membrane thickness, order parameters, and diffusion coefficients of the lipid molecules in the different membrane models. The developed models showed distinguished behaviours in freshwater and marine microalgae lipid membranes. Moreover, it was also observed that the lipid composition of marine microalgae results in more compact and ordered membranes. Our results highlight the importance of computational approaches in advancing membrane biophysics and provide a detailed molecular perspective on the lipid membranes of different species of freshwater and marine microalgae, providing a comprehensive basis to understand their biological roles and potential biotechnological applications.
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微藻脂膜模型:计算生物物理学特征
微藻是一种具有光合作用的生物,在生物技术和环境科学方面的潜在应用引起了人们的广泛关注。人们对利用微藻生物量生产营养品和药品的兴趣日益浓厚。微藻脂膜在多种生物学功能中起着至关重要的作用,是基础生物学和应用生物技术研究的前沿。因此,计算脂质双层模型为在原子水平上揭示这些膜的复杂性提供了一个强大的工具包,为推进我们在基础生物过程和应用生物技术发展方面的知识提供了至关重要的见解。本工作的目的是开发计算脂质双层模型来表征不同微藻物种的膜行为。通过比较这些模型,我们试图确定影响膜稳定性和功能的关键因素,这可能有助于优化基于微藻的应用,即评估药物与微藻脂质膜的相互作用。以此为基础,建立了淡水小球藻(Chlorella vulgaris)、莱茵衣藻(Chlamydomonas reinhardtii)和场景藻(Scenedesmus sp.)以及海洋纳米藻(Nannochloropsis sp.)和limacinum SR-21等5种微藻外脂膜的脂质双层模型。采用计算生物物理表征方法,分析了不同膜模型中脂质分子的面积/脂质、膜厚度、有序参数和扩散系数等膜性质。所建立的模型在淡水和海洋微藻脂膜中表现出不同的行为。此外,还观察到海洋微藻的脂质组成导致膜更紧密和有序。我们的研究结果强调了计算方法在推进膜生物物理学中的重要性,并提供了不同种类淡水和海洋微藻脂质膜的详细分子视角,为了解其生物学作用和潜在的生物技术应用提供了全面的基础。
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来源期刊
Algal Research-Biomass Biofuels and Bioproducts
Algal Research-Biomass Biofuels and Bioproducts BIOTECHNOLOGY & APPLIED MICROBIOLOGY-
CiteScore
9.40
自引率
7.80%
发文量
332
期刊介绍: Algal Research is an international phycology journal covering all areas of emerging technologies in algae biology, biomass production, cultivation, harvesting, extraction, bioproducts, biorefinery, engineering, and econometrics. Algae is defined to include cyanobacteria, microalgae, and protists and symbionts of interest in biotechnology. The journal publishes original research and reviews for the following scope: algal biology, including but not exclusive to: phylogeny, biodiversity, molecular traits, metabolic regulation, and genetic engineering, algal cultivation, e.g. phototrophic systems, heterotrophic systems, and mixotrophic systems, algal harvesting and extraction systems, biotechnology to convert algal biomass and components into biofuels and bioproducts, e.g., nutraceuticals, pharmaceuticals, animal feed, plastics, etc. algal products and their economic assessment
期刊最新文献
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