Network pharmacology and molecular docking technology-based predictive study and potential targets analysis of icariin for the treatment of diabetic nephropathy

IF 2.2 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemical and biophysical research communications Pub Date : 2025-03-05 Epub Date: 2025-02-06 DOI:10.1016/j.bbrc.2025.151434
Min Chen , Yujie Zhou , Jianglin Yang , Huixiong Yuan
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引用次数: 0

Abstract

Objective

Epimedium glycoside is a flavonoid compound in Epimedium, which has been found to alleviate various chronic diseases. The effect and mechanism of icariin on the treatment of diabetes nephropathy still need to be clarified. In this study, we conducted network pharmacology and molecular docking analysis to reveal the mechanism of icariin treating DKD, and then validated its efficacy using a cell model.

Method

The structure and targets of icariin were screened using Traditional Chinese Medicine Systems Pharmacology (TCMSP), and their targets were annotated. Retrieve DKD targets from OMIM, GeneCards, and TTD databases. We constructed a protein-protein interaction (PPI) network using the STRING platform and visualized the results using Cytoscape 3.9.1 software. We also conducted GO and KEGG enrichment analysis on icariin and then performed molecular docking between icariin and key targets. Finally, we established a cell model of DKD to evaluate the efficacy of icariin in treating DKD.

Result

A total of 77 icariin targets were associated with DKD. The GO and KEGG enrichment results showed that the therapeutic effect of icariin on DKD was significantly correlated with inflammatory response, cell apoptosis, epithelial-mesenchymal transition, and PI3K/AKT signaling pathway. The molecular docking results indicate that icariin has a high affinity for key targets EGER, AKT1, and IGF1. Cell experiments showed that icariin inhibited high glucose-induced EMT, fibrosis-related proteins, levels of inflammatory factors TGF-β1, IL-6, and TNF-α, as well as phosphorylation of phosphatidylinositol 3-kinase (PI3K) and protein kinase B (AKT) in renal tubular epithelial cells. In addition, icariin inhibited the increase in EGER and AKT1 mRNA levels caused by high glucose and alleviated the decrease in IGF1 mRNA levels.

Conclusion

Epimedium glycoside may protect DKD by targeting EGER, AKT1, and IGF1 to inhibit PI3K/AKT signaling, but the specific mechanism needs further exploration.
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基于网络药理学与分子对接技术的淫羊藿苷治疗糖尿病肾病的预测研究及潜在靶点分析
目的淫羊藿苷是淫羊藿中的一种类黄酮化合物,具有缓解多种慢性疾病的作用。淫羊藿苷治疗糖尿病肾病的作用及机制尚需进一步研究。本研究通过网络药理学和分子对接分析,揭示淫羊藿苷治疗DKD的作用机制,并通过细胞模型验证其疗效。方法采用中药系统药理学(TCMSP)方法筛选淫羊藿苷的结构和靶点,并对其靶点进行标注。从OMIM、GeneCards和TTD数据库中检索DKD目标。我们利用STRING平台构建蛋白-蛋白相互作用(PPI)网络,并利用Cytoscape 3.9.1软件对结果进行可视化。我们还对淫羊藿苷进行了GO和KEGG富集分析,并对淫羊藿苷与关键靶点进行了分子对接。最后,建立DKD细胞模型,评价淫羊藿苷对DKD的治疗作用。结果共有77个淫羊藿苷靶点与DKD相关。GO和KEGG富集结果显示淫羊藿苷对DKD的治疗作用与炎症反应、细胞凋亡、上皮-间质转化和PI3K/AKT信号通路显著相关。分子对接结果表明淫羊藿苷对关键靶点EGER、AKT1和IGF1具有高亲和力。细胞实验表明,淫羊藿苷抑制高糖诱导的EMT、纤维化相关蛋白、炎症因子TGF-β1、IL-6和TNF-α水平,以及磷脂酰肌醇3-激酶(PI3K)和蛋白激酶B (AKT)的磷酸化。此外,淫羊藿苷抑制高糖引起的EGER和AKT1 mRNA水平升高,缓解IGF1 mRNA水平下降。结论淫藿苷可能通过靶向EGER、AKT1、IGF1抑制PI3K/AKT信号通路来保护DKD,但具体机制有待进一步探讨。
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来源期刊
Biochemical and biophysical research communications
Biochemical and biophysical research communications 生物-生化与分子生物学
CiteScore
6.10
自引率
0.00%
发文量
1400
审稿时长
14 days
期刊介绍: Biochemical and Biophysical Research Communications is the premier international journal devoted to the very rapid dissemination of timely and significant experimental results in diverse fields of biological research. The development of the "Breakthroughs and Views" section brings the minireview format to the journal, and issues often contain collections of special interest manuscripts. BBRC is published weekly (52 issues/year).Research Areas now include: Biochemistry; biophysics; cell biology; developmental biology; immunology ; molecular biology; neurobiology; plant biology and proteomics
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