Comparisons of PK-Sim and R program for physiologically based pharmacokinetic model development for broiler chickens and laying hens: meloxicam as a case study.

IF 4.1 3区 医学 Q2 TOXICOLOGY Toxicological Sciences Pub Date : 2025-05-01 DOI:10.1093/toxsci/kfaf016
Zhicheng Zhang, Lisa A Tell, Zhoumeng Lin
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Abstract

Physiologically based pharmacokinetic (PBPK) models play a critical role in evaluating drug residue concentrations and estimating withdrawal intervals (WDIs) for food-producing animals. These models are facilitated by various programming software (e.g. R program) and predefined PBPK platforms, such as Open Systems Pharmacology (OSP) suite integrated by PK-Sim and Mobi, which offers a user-friendly graphical interface. Both R and OSP are open-source software. However, there is a lack of comparative analyses of both platforms and their potential impact on PBPK models. This study aims to evaluate the influence of different platforms on PBPK workflow, parameters selection, and output results, which is exemplified via a case study for meloxicam in chickens in both platforms. Our findings indicate that while the choice of PBPK platforms affected the workflow and input parameters, the predictive performance of established models remained consistent across both platforms. Both platforms predicted meloxicam pharmacokinetics in plasma and tissues accurately across different exposure scenarios. The PBPK-estimated WDIs under various dosing regimens from both platforms were quite similar. Notable differences between OSP suite and R were primarily observed during sensitivity analysis and parameter identification processes, especially the time consumption. This study offers insight into software variances and their implications for translating PBPK modeling knowledge between users of 2 platforms. Also, it provides a PBPK model structure template implemented in both software platforms for food safety and risk assessment in poultry and a detailed tutorial on expanding the model structure in PK-Sim and Mobi.

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PK-Sim®和R程序在肉仔鸡和蛋鸡生理药代动力学模型开发中的比较——以美洛昔康为例
基于生理的药代动力学(PBPK)模型在评价食用动物的药物残留浓度和估计停药间隔(WDIs)中起着至关重要的作用。这些模型由各种编程软件(例如R程序)和预定义的PBPK平台促进,例如由PK-Sim®和Mobi集成的开放系统药理学(OSP)套件,它提供了一个用户友好的图形界面。R和OSP都是开源软件。然而,缺乏对这两种平台及其对PBPK模型的潜在影响的比较分析。本研究旨在评估不同平台对PBPK工作流程、参数选择和输出结果的影响,并通过两种平台对美洛昔康在鸡体内的案例研究来举例说明。我们的研究结果表明,虽然PBPK平台的选择会影响工作流程和输入参数,但已建立的模型在两种平台上的预测性能保持一致。两种平台都能准确预测不同暴露情景下美洛昔康在血浆和组织中的药代动力学。两个平台在不同给药方案下pbpk估计的wdi非常相似。OSP套件与R之间的显著差异主要体现在灵敏度分析和参数识别过程中,尤其是耗时。本研究提供了对软件差异及其在两个平台用户之间翻译PBPK建模知识的含义的见解。此外,本文还提供了在家禽食品安全和风险评估软件平台上实现的PBPK模型结构模板,以及在PK-Sim®和Mobi中扩展模型结构的详细教程。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Toxicological Sciences
Toxicological Sciences 医学-毒理学
CiteScore
7.70
自引率
7.90%
发文量
118
审稿时长
1.5 months
期刊介绍: The mission of Toxicological Sciences, the official journal of the Society of Toxicology, is to publish a broad spectrum of impactful research in the field of toxicology. The primary focus of Toxicological Sciences is on original research articles. The journal also provides expert insight via contemporary and systematic reviews, as well as forum articles and editorial content that addresses important topics in the field. The scope of Toxicological Sciences is focused on a broad spectrum of impactful toxicological research that will advance the multidisciplinary field of toxicology ranging from basic research to model development and application, and decision making. Submissions will include diverse technologies and approaches including, but not limited to: bioinformatics and computational biology, biochemistry, exposure science, histopathology, mass spectrometry, molecular biology, population-based sciences, tissue and cell-based systems, and whole-animal studies. Integrative approaches that combine realistic exposure scenarios with impactful analyses that move the field forward are encouraged.
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