A Multi-Method Approach to Analyzing MOFs for Chemical Warfare Simulant Capture: Molecular Simulation, Machine Learning, and Molecular Fingerprints.

IF 4.3 3区 材料科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Nanomaterials Pub Date : 2025-01-24 DOI:10.3390/nano15030183
Zhongyuan Ming, Min Zhang, Shouxin Zhang, Xiaopeng Li, Xiaoshan Yan, Kexin Guan, Yu Li, Yufeng Peng, Jinfeng Li, Heguo Li, Yue Zhao, Zhiwei Qiao
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Abstract

Mustard gas (HD) is a well-known chemical warfare agent, recognized for its extreme toxicity and severe hazards. Metal-organic frameworks (MOFs), with their unique structural properties, show significant potential for HD adsorption applications. Due to the extreme hazards of HD, most experimental studies focus on its simulants, but molecular simulation research on these simulants remains limited. Simulation analyses of simulants can uncover structure-performance relationships and enable experimental validation, optimizing methods, and improving material design and performance predictions. This study integrates molecular simulations, machine learning (ML), and molecular fingerprinting (MFs) to identify MOFs with high adsorption performance for the HD simulant diethyl sulfide (DES), followed by in-depth structural analysis and comparison. First, MOFs are categorized into Top, Middle, and Bottom materials based on their adsorption efficiency. Univariate analysis, machine learning, and molecular fingerprinting are then used to identify and compare the distinguishing features and fingerprints of each category. Univariate analysis helps identify the optimal structural ranges of Top and Bottom materials, providing a reference for initial material screening. Machine learning feature importance analysis, combined with SHAP methods, identifies the key features that most significantly influence model predictions across categories, offering valuable insights for future material design. Molecular fingerprint analysis reveals critical fingerprint combinations, showing that adsorption performance is optimized when features such as metal oxides, nitrogen-containing heterocycles, six-membered rings, and C=C double bonds co-exist. The integrated analysis using HTCS, ML, and MFs provides new perspectives for designing high-performance MOFs and demonstrates significant potential for developing materials for the adsorption of CWAs and their simulants.

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分析化学战争模拟捕获mof的多方法方法:分子模拟、机器学习和分子指纹。
芥子气(HD)是一种众所周知的化学战剂,以其极高的毒性和严重的危害而闻名。金属有机骨架(MOFs)以其独特的结构特性,在HD吸附方面具有重要的应用潜力。由于HD的极端危害,大多数实验研究都集中在其模拟物上,但对这些模拟物的分子模拟研究仍然有限。模拟物的仿真分析可以揭示结构与性能之间的关系,使实验验证、优化方法、改进材料设计和性能预测成为可能。本研究结合分子模拟、机器学习(ML)和分子指纹(MFs)技术,鉴定出对HD模拟物二乙基硫化物(DES)具有高吸附性能的MFs,并进行深入的结构分析和比较。首先,根据mof的吸附效率将其分为Top、Middle和Bottom三种材料。然后使用单变量分析、机器学习和分子指纹识别来识别和比较每个类别的特征和指纹。单变量分析有助于确定顶部和底部材料的最佳结构范围,为初始材料筛选提供参考。机器学习特征重要性分析与SHAP方法相结合,确定了对不同类别的模型预测影响最大的关键特征,为未来的材料设计提供了有价值的见解。分子指纹分析揭示了关键指纹组合,表明金属氧化物、含氮杂环、六元环、C=C双键等特征共存时,吸附性能最优。HTCS、ML和MFs的综合分析为设计高性能MFs提供了新的视角,并展示了开发吸附CWAs及其模拟物的材料的巨大潜力。
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来源期刊
Nanomaterials
Nanomaterials NANOSCIENCE & NANOTECHNOLOGY-MATERIALS SCIENCE, MULTIDISCIPLINARY
CiteScore
8.50
自引率
9.40%
发文量
3841
审稿时长
14.22 days
期刊介绍: Nanomaterials (ISSN 2076-4991) is an international and interdisciplinary scholarly open access journal. It publishes reviews, regular research papers, communications, and short notes that are relevant to any field of study that involves nanomaterials, with respect to their science and application. Thus, theoretical and experimental articles will be accepted, along with articles that deal with the synthesis and use of nanomaterials. Articles that synthesize information from multiple fields, and which place discoveries within a broader context, will be preferred. There is no restriction on the length of the papers. Our aim is to encourage scientists to publish their experimental and theoretical research in as much detail as possible. Full experimental or methodical details, or both, must be provided for research articles. Computed data or files regarding the full details of the experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material. Nanomaterials is dedicated to a high scientific standard. All manuscripts undergo a rigorous reviewing process and decisions are based on the recommendations of independent reviewers.
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