Lalit Pun Magar, Jeremy Sandifer, Deepak Khatri, Sudip Poudel, Suraj Kc, Buddhi Gyawali, Maheteme Gebremedhin, Anuj Chiluwal
{"title":"Plant height measurement using UAV-based aerial RGB and LiDAR images in soybean.","authors":"Lalit Pun Magar, Jeremy Sandifer, Deepak Khatri, Sudip Poudel, Suraj Kc, Buddhi Gyawali, Maheteme Gebremedhin, Anuj Chiluwal","doi":"10.3389/fpls.2025.1488760","DOIUrl":null,"url":null,"abstract":"<p><p>Phenotypic traits like plant height are crucial in assessing plant growth and physiological performance. Manual plant height measurement is labor and time-intensive, low throughput, and error-prone. Hence, aerial phenotyping using aerial imagery-based sensors combined with image processing technique is quickly emerging as a more effective alternative to estimate plant height and other morphophysiological parameters. Studies have demonstrated the effectiveness of both RGB and LiDAR images in estimating plant height in several crops. However, there is limited information on their comparison, especially in soybean (<i>Glycine max</i> [L.] Merr.). As a result, there is not enough information to decide on the appropriate sensor for plant height estimation in soybean. Hence, the study was conducted to identify the most effective sensor for high throughput aerial phenotyping to estimate plant height in soybean. Aerial images were collected in a field experiment at multiple time points during soybean growing season using an Unmanned Aerial Vehicle (UAV or drone) equipped with RGB and LiDAR sensors. Our method established the relationship between manually measured plant height and the height obtained from aerial platforms. We found that the LiDAR sensor had a better performance (R<sup>2</sup> = 0.83) than the RGB camera (R<sup>2</sup> = 0.53) when compared with ground reference height during pod growth and seed filling stages. However, RGB showed more reliability in estimating plant height at physiological maturity when the LiDAR could not capture an accurate plant height measurement. The results from this study contribute to identifying ideal aerial phenotyping sensors to estimate plant height in soybean during different growth stages.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"16 ","pages":"1488760"},"PeriodicalIF":4.1000,"publicationDate":"2025-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11821976/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Plant Science","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3389/fpls.2025.1488760","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 0
Abstract
Phenotypic traits like plant height are crucial in assessing plant growth and physiological performance. Manual plant height measurement is labor and time-intensive, low throughput, and error-prone. Hence, aerial phenotyping using aerial imagery-based sensors combined with image processing technique is quickly emerging as a more effective alternative to estimate plant height and other morphophysiological parameters. Studies have demonstrated the effectiveness of both RGB and LiDAR images in estimating plant height in several crops. However, there is limited information on their comparison, especially in soybean (Glycine max [L.] Merr.). As a result, there is not enough information to decide on the appropriate sensor for plant height estimation in soybean. Hence, the study was conducted to identify the most effective sensor for high throughput aerial phenotyping to estimate plant height in soybean. Aerial images were collected in a field experiment at multiple time points during soybean growing season using an Unmanned Aerial Vehicle (UAV or drone) equipped with RGB and LiDAR sensors. Our method established the relationship between manually measured plant height and the height obtained from aerial platforms. We found that the LiDAR sensor had a better performance (R2 = 0.83) than the RGB camera (R2 = 0.53) when compared with ground reference height during pod growth and seed filling stages. However, RGB showed more reliability in estimating plant height at physiological maturity when the LiDAR could not capture an accurate plant height measurement. The results from this study contribute to identifying ideal aerial phenotyping sensors to estimate plant height in soybean during different growth stages.
期刊介绍:
In an ever changing world, plant science is of the utmost importance for securing the future well-being of humankind. Plants provide oxygen, food, feed, fibers, and building materials. In addition, they are a diverse source of industrial and pharmaceutical chemicals. Plants are centrally important to the health of ecosystems, and their understanding is critical for learning how to manage and maintain a sustainable biosphere. Plant science is extremely interdisciplinary, reaching from agricultural science to paleobotany, and molecular physiology to ecology. It uses the latest developments in computer science, optics, molecular biology and genomics to address challenges in model systems, agricultural crops, and ecosystems. Plant science research inquires into the form, function, development, diversity, reproduction, evolution and uses of both higher and lower plants and their interactions with other organisms throughout the biosphere. Frontiers in Plant Science welcomes outstanding contributions in any field of plant science from basic to applied research, from organismal to molecular studies, from single plant analysis to studies of populations and whole ecosystems, and from molecular to biophysical to computational approaches.
Frontiers in Plant Science publishes articles on the most outstanding discoveries across a wide research spectrum of Plant Science. The mission of Frontiers in Plant Science is to bring all relevant Plant Science areas together on a single platform.