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High nitrogen use efficiency in wheat is explained by a longer fast-increase period and adequate pre-anthesis nitrogen accumulation. 小麦氮素利用效率高的主要原因是快速增长期较长,花前氮素积累充足。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-23 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1727679
Minglong Yu, Churong Liu, Hongrun Liu, Yushi Zhang, Zhaohu Li, Mingcai Zhang

Introduction: Nitrogen (N)-efficient wheat cultivars achieve higher grain yields with equivalent N fertilizer inputs, and the grain filling character largely determines grain weight (GW) in cereal crops. However, the relationship of grain filling traits and N responsiveness (Nr) in wheat has not been fully evaluated.

Methods: A two-year field experiment evaluated five wheat cultivars across varying N levels (0, 75, 150, and 225 kg N ha-1) to assess how grain filling traits and N-related characteristics influence Nr.

Results: The results showed that N-responsiveness wheat cultivars exhibited higher grain yields and critical N supply, alongside lower chlorophyll degradation rates (CDR). The direct path coefficient of GW on yield was 0.478, which explained 85.2% of the yield variation and was negatively correlated with other yield components. Across the combinations of cultivar and N supply, the variation in GW was primarily driven by the duration of fast-increase period (Tfast), rather than by the duration of slow-increase period (T slow) and slight-increase period (Tslight). Furthermore, the sensitivity of T fast to N supply explained the Nr of grain yield in wheat. Structural equation modeling showed that adequate pre-anthesis N accumulation was the dominant factor driving the extension of T fast in high N-responsiveness wheat cultivates, secondary to lower CDR, which ultimately resulted in the highest GW. In addition, prolonging T fast induced enhanced post-anthesis N translocation in wheat, which contributed to higher N use efficiency (NUE).

Discussion: Prolonging the T fast enhances N responsiveness in wheat grain yield, providing a novel framework for evaluating NUE. This finding also highlights the critical role of elevated N accumulation at anthesis under N fertilization.

氮肥高效小麦品种在同等氮肥投入下可获得较高的产量,籽粒灌浆特性在很大程度上决定了谷类作物的粒重。然而,小麦籽粒灌浆性状与氮素响应性的关系尚未得到充分的评价。方法:通过为期两年的田间试验,评估了5个小麦品种在不同N水平(0、75、150和225 kg N hm -1)下籽粒灌浆性状和N相关性状对氮含量的影响。结果表明,对N敏感的小麦品种表现出更高的产量和临界氮供应,同时叶绿素降解率(CDR)更低。GW对产量的直接通径系数为0.478,解释了85.2%的产量变化,与其他产量成分呈负相关。在不同品种和氮素供应组合中,土壤水分的变化主要受快速增长期(Tfast)的影响,而不是受缓慢增长期(T slow)和轻微增长期(Tslight)的影响。此外,T对氮素供应的敏感性解释了小麦籽粒产量的Nr。结构方程模型表明,在高氮响应性小麦栽培中,充足的花前氮积累是推动T快速扩展的主导因素,其次是较低的CDR,最终导致最高的GW。延长施氮时间可以促进小麦花后氮素转运,提高氮素利用效率。讨论:延长施氮时间可提高小麦籽粒产量对氮素的响应性,为氮素利用效率的评估提供了一个新的框架。这一发现也强调了氮肥施肥下花期氮积累增加的关键作用。
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引用次数: 0
Genome-wide identification and analysis of expression of pathogenesis-related protein 1 (PR-1) gene family in brown algae. 褐藻致病性相关蛋白1 (PR-1)基因家族的全基因组鉴定及表达分析。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-23 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1754480
Linhong Teng, Shuxia Liang, Jiayi Chen, Bostjan Kobe, Naihao Ye, Hui Wang, Jian Song

The pathogen-related protein 1 (PR-1) family plays an important role in plant response to biotic and abiotic stresses. PR-1 proteins have been studied in many plant species; however, they were not systematically studied in brown algae, which are important components of coastal ecosystems and have great economic value in the aquaculture industry. In the present study, we characterized the structure, evolution and expression of PR-1 proteins in brown algal genomes. A total of 141 PR-1s were identified in the 19 brown algal genomes, with an average of 7 genes in each species. Most PR-1s are acidic, while only 18 PR-1s are basic. Phylogenetic analysis showed that PR-1s in brown algae clustered into five clades, and showed no strong relationship with other lineages, suggesting an ancient origin. All the PR-1s contain a conserved CAP superfamily domain. Some PR-1s contain distinct functional domains, such as the WSC, Blect, and Bulb-type lectin domains, which are involved in carbohydrate binding. Their promoter regions were enriched in stress-response elements, hormone-response elements, growth and development elements. GO and KEGG annotation showed that brown algal PR-1 proteins may be involved in diverse roles and pathways. Moreover, expression analysis shows that some PR-1s, especially basic proteins are responsive to abiotic stress conditions and life stage development, further suggesting they participate in multiple functional pathways. Our results provide important data for future research on the function of brown algal PR-1 family genes.

病原体相关蛋白1 (PR-1)家族在植物对生物和非生物胁迫的响应中起着重要作用。PR-1蛋白已在许多植物物种中被研究;褐藻是海岸带生态系统的重要组成部分,在水产养殖业中具有巨大的经济价值,但对褐藻的研究还不够系统。在本研究中,我们对褐藻基因组中PR-1蛋白的结构、进化和表达进行了表征。在19个褐藻基因组中共鉴定出141个pr -1基因,平均每个物种有7个基因。大多数pr -1是酸性的,只有18种pr -1是碱性的。系统发育分析表明,pr -1在褐藻中可分为5个分支,与其他分支关系不明显,表明其起源较早。所有的pr -1都包含一个保守的CAP超家族结构域。一些pr -1含有不同的功能域,如WSC、Blect和bulb型凝集素结构域,它们参与碳水化合物的结合。它们的启动子区域富含应激响应元件、激素响应元件、生长发育元件。GO和KEGG注释表明褐藻PR-1蛋白可能参与多种作用和途径。此外,表达分析表明,一些pr -1,特别是碱性蛋白,对非生物应激条件和生命阶段发育有反应,进一步表明它们参与了多种功能途径。本研究结果为进一步研究褐藻PR-1家族基因的功能提供了重要数据。
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引用次数: 0
How much can reticulate evolution entangle plant systematics? Revisiting subfamilial classification of the Malvatheca clade (Malvaceae) on the basis of phylogenomics. 网状进化会在多大程度上纠缠植物分类学?在系统基因组学的基础上,重新审视马尔瓦科马尔瓦科进化支的亚家族分类。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-23 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1717745
Gustavo Luna, Lucas Costa, Flávia Fonseca Pezzini, Nisa Karimi, Joeri Sergej Strijk, Jefferson Carvalho-Sobrinho, Matheus Colli-Silva, André Marques, Gustavo Souza

Reticulate evolution (RE), involving hybridization and related processes, generates network-like rather than strictly bifurcating relationships among lineages and can obscure phylogenetic relationships. Detecting ancient hybridization is particularly challenging, as genomic signals may erode over time. The Malvatheca clade (Malvaceae), marked by multiple paleopolyploidy events since it's estimated origin 66 my, offers a useful model for examining RE. Its three subfamilies-Bombacoideae (with high chromosome numbers, mostly trees), Malvoideae (lower chromosome numbers, mostly herbs), and the recently described Matisioideae-show unresolved relationships, with several taxa of uncertain placement. We conducted a phylogenomic analysis of 69 Malvatheca species via complete plastomes, 35S rDNA cistrons, nuclear low copy genes and comparative repeatome data. Most of the datasets consistently resolved four clades: (I) Bombacoideae, (II) Malvoideae, (III) Matisioideae, and (IV) a heterogeneous assemblage including representatives of Malvoideae, Matisioideae and several incertae sedis taxa. Chromosome numbers were negatively correlated with repeatome diversity: Bombacoideae presented higher counts but lower repeat diversity, possibly reflecting slower repeat evolution associated with woody growth forms. In contrast, clades III and IV showed marked heterogeneity in both chromosome number and repeat composition, which is consistent with a reticulate origin. Overall, our results show evidence of ancient hybridization and polyploidy in shaping Malvatheca evolution. These results highlight that reticulation and genome dynamics, rather than taxonomic boundaries alone, are central to understanding the diversification of Malvatheca.

网状进化(RE)涉及杂交和相关过程,在谱系之间产生类似网络的关系,而不是严格的分支关系,并可能模糊系统发育关系。检测古代杂交尤其具有挑战性,因为基因组信号可能随着时间的推移而被侵蚀。Malvatheca分支(malvacae)自66年估计起源以来,以多次古多倍体事件为标志,为研究RE提供了一个有用的模型。它的三个亚科- bombacoideae(染色体数目高,主要是树木),Malvoideae(染色体数目低,主要是草本植物)和最近描述的matisioideae -显示出未解决的关系,有几个分类群的位置不确定。通过完整质体、35S rDNA反顺子、核低拷贝基因和比较重复组数据对69种马尔瓦塞卡(Malvatheca)进行了系统基因组分析。大多数数据集一致地划分了四个分支:(I) Bombacoideae, (II) Malvoideae, (III) Matisioideae,以及(IV)包括Malvoideae, Matisioideae和几个intertae sedis分类群的代表的异质组合。染色体数目与重复组多样性呈负相关:Bombacoideae的重复组数量较高,但重复组多样性较低,这可能反映了与木本生长形式相关的重复组进化较慢。而进化支III和进化支IV在染色体数目和重复组成上均表现出明显的异质性,这与网状起源一致。总的来说,我们的结果显示了古代杂交和多倍体在塑造马尔瓦塞卡进化中的证据。这些结果强调了网络和基因组动力学,而不是单独的分类界限,是理解Malvatheca多样化的核心。
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引用次数: 0
Correction: RNA editing events and expression profiles of mitochondrial protein-coding genes in the endemic and endangered medicinal plant, Corydalis saxicola. 更正:地方性和濒危药用植物——沙尼索拉(Corydalis saxicola)线粒体蛋白编码基因的RNA编辑事件和表达谱。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-23 eCollection Date: 2026-01-01 DOI: 10.3389/fpls.2026.1783725
Cui Li, Han Liu, Mei Qin, Yao-Jing Tan, Xia-Lian Ou, Xiao-Ying Chen, Ying Wei, Zhan-Jiang Zhang, Ming Lei

[This corrects the article DOI: 10.3389/fpls.2024.1332460.].

[这更正了文章DOI: 10.3389/fpl .2024.1332460.]。
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引用次数: 0
β-cyclocitral as a cross-species mediator of abiotic stress signaling: insights and future directions toward crop improvement. β-环柠檬醛作为非生物胁迫信号的跨物种中介:对作物改良的见解和未来方向。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-23 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1646314
Grace Lachica, Prakash Basnet, Antonio Laurena, Eureka Teresa Ocampo, Ik-Young Choi

Abiotic stresses such as drought, salinity, heavy-metal toxicity, and photooxidative damage severely constrain global crop productivity, a challenge intensified by ongoing climate change. The apocarotenoid β-cyclocitral (β-CC), produced via both carotenoid cleavage dioxygenase (CCD)-mediated and reactive oxygen species (ROS)-driven oxidation, has emerged as a conserved signaling molecule that enhances plant adaptation to environmental stress. β-CC mitigates oxidative damage, promotes root system remodeling, and activates detoxification pathways through ABA-independent mechanisms involving the transcriptional regulators MBS1 and SCL14. Its oxidized derivative, β-cyclocitric acid (β-CCA), extends this signaling framework by modulating the cyclin kinase inhibitor SMR5 and the cytochrome P450 gene CYP81D11, thereby strengthening photosynthetic capacity, ROS control, and developmental reprogramming under drought and high-light stress. Beyond vegetative responses, β-CC also enhances seed vigor and longevity through apocarotenoid-dependent regulation of antioxidant activity and aquaporin expression. Comparative studies across Arabidopsis, rice, tomato, quinoa, and peach reveal both conserved and species-specific outcomes, underscoring the versatility of β-CC/β-CCA signaling. The broad occurrence of these apocarotenoids highlights their potential as natural biostimulants and molecular tools for improving stress resilience in crops. Although direct studies in soybean remain limited, conserved orthologs and signaling components point to promising translational opportunities. Future research should clarify the dynamics of β-CC and β-CCA accumulation, validate conserved gene networks such as MBS1/SCL14/CYP81D11, and develop stable, field-compatible delivery systems. Integrating mechanistic and physiological insights from model species will accelerate the application of β-CC-based strategies for climate-resilient agriculture.

干旱、盐碱、重金属毒性和光氧化损害等非生物胁迫严重制约了全球作物生产力,而气候变化加剧了这一挑战。类伪胡萝卜素β-环柠檬醛(β-CC)是通过类胡萝卜素裂解双加氧酶(CCD)介导和活性氧(ROS)驱动的氧化作用产生的一种保守的信号分子,可增强植物对环境胁迫的适应性。β-CC减轻氧化损伤,促进根系重塑,并通过aba独立的机制激活解毒途径,包括转录调节因子MBS1和SCL14。其氧化衍生物β-环柠檬酸(β-CCA)通过调节细胞周期蛋白激酶抑制剂SMR5和细胞色素P450基因CYP81D11扩展了这一信号框架,从而增强了干旱和强光胁迫下的光合能力、ROS控制和发育重编程。除了营养反应,β-CC还通过类胡萝卜素依赖的抗氧化活性和水通道蛋白表达调节来增强种子活力和寿命。对拟南芥、水稻、番茄、藜麦和桃子的比较研究揭示了保守和物种特异性的结果,强调了β-CC/β-CCA信号的多功能性。这些类伪胡萝卜素的广泛存在突出了它们作为天然生物刺激素和提高作物抗逆性的分子工具的潜力。尽管对大豆的直接研究仍然有限,但保守的同源物和信号成分指出了有希望的翻译机会。未来的研究应阐明β-CC和β-CCA积累的动力学,验证保守的基因网络,如MBS1/SCL14/CYP81D11,并开发稳定的、田间兼容的给药系统。整合模式物种的机制和生理见解将加速基于β- cc的气候适应型农业战略的应用。
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引用次数: 0
Responses of germination, photosynthesis, and gene expression in four cotton varieties under drought stress. 4个棉花品种对干旱胁迫下萌发、光合作用及基因表达的响应
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-23 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1736650
Jiazila Baha, Xiaohong Zhao, Yage Li, Xue Zhai, Xinchuan Cao, Weifeng Guo

Background: Drought is a crucial abiotic stress factor affecting the growth and development of cotton, and there is significant differentiation in drought resistant among different cotton varieties. To reveal the drought resistance mechanisms of four cotton varieties, this study conducted a systematic analysis across multiple stages and multiple indicators.

Methods: In this study, two drought resistant varieties (J206-5 and Jiumian 20) and two drought sensitive varieties (Xinluzhong 77 and Xinluzhong 67) were selected as experimental materials for seed germination, drought related gene expression during seedling stage, and photosynthetic indicators during flower and boll stage.

Results: The six germination indicators of four cotton varieties showed a decreasing trend with the increase of PEG6000 concentration. Under 10% PEG6000 treatment, the relative germination potential, relative germination rate, relative germination index, and relative root fresh weight of drought resistant varieties were significantly higher than those of drought sensitive varieties. Under drought stress until July 19th, the Pn, Tr, and SPAD of drought resistant varieties were significantly higher than those of drought sensitive varieties. Under drought stress until August 19th, the Ci and SPAD of drought resistant varieties were significantly higher than those of drought sensitive varieties, and the Pn of drought resistant varieties was significantly higher than that of drought sensitive variety Xinluzhong 67. When drought resistant varieties were subjected to drought stress for 8d, except for the GhPPO-3 gene, the expression levels of the other 8 genes were significantly upregulated and reached their maximum values, and the expression levels were significantly higher than those of drought sensitive varieties.

Conclusion: Under drought stress, drought resistant cotton varieties exhibit better seed germination, photosynthesis, and expression levels of drought related genes. This study provides a theoretical basis for cotton drought resistance breeding.

背景:干旱是影响棉花生长发育的重要非生物胁迫因子,不同棉花品种间抗旱性存在显著差异。为了揭示4个棉花品种的抗旱机理,本研究跨阶段、多指标进行了系统分析。方法:选择2个抗旱品种J206-5、九棉20和2个抗旱品种新鲁中77、新鲁中67作为种子萌发、苗期干旱相关基因表达和花铃期光合指标的试验材料。结果:随着PEG6000浓度的增加,4个棉花品种的6项发芽指标均呈下降趋势。在10% PEG6000处理下,抗旱品种的相对发芽势、相对发芽率、相对发芽指数和相对根鲜重显著高于干旱敏感品种。截至7月19日的干旱胁迫下,抗旱品种的Pn、Tr和SPAD均显著高于干旱敏感品种。截至8月19日的干旱胁迫下,抗旱品种的Ci和SPAD显著高于干旱敏感品种,抗旱品种的Pn显著高于干旱敏感品种新鲁中67。当抗旱品种经受干旱胁迫8d时,除GhPPO-3基因外,其余8个基因的表达量均显著上调并达到最大值,且表达量显著高于干旱敏感品种。结论:在干旱胁迫下,抗旱棉品种的种子萌发、光合作用和干旱相关基因表达水平均有所提高。本研究为棉花抗旱育种提供了理论依据。
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引用次数: 0
A segment of Triticum timopheevii chromosome 3G confers type II Fusarium head blight resistance and reduces DON accumulation in wheat. 小麦染色体3G片段具有抗II型赤霉病和减少DON积累的作用。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-23 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1743533
Andrew Steed, Surbhi Grewal, Roshani Badgami, Julie King, Ian P King, Paul Nicholson

Fusarium head blight (FHB) is a major disease of small grain cereals that is particularly damaging to wheat and can result in yield losses of up to 80%. Resistance to FHB in wheat is broadly classified as resistance to initial infection (type I) or resistance to disease spread within the spike (type II). A high level of type I FHB resistance was reported in an accession of wheat wild relative Triticum timopheevii. Hexaploid wheat-T. timopheevii introgression lines carrying a segment of the short arm of chromosome 3G (Chr3G) of this accession expressed high levels of FHB resistance following spray inoculation. Further analyses of these introgression lines showed that the Chr3G segment confers a potent type II resistance, accompanied by improved grain weight retention and reduced deoxynivalenol (DON) accumulation in grain. These results indicate that Chr3G resistance has the potential to dramatically reduce FHB susceptibility and DON accumulation in grain in wheat cultivars. An introgression of a segment of Chr7At into the short arm of Chr7A also enhanced type II FHB resistance.

赤霉病是小粒谷物的一种主要病害,对小麦的危害特别大,可导致高达80%的产量损失。小麦对赤霉病的抗性大致分为对初始感染的抗性(I型)或对穗内疾病传播的抗性(II型)。据报道,小麦野生亲缘种小麦(Triticum timopheevi)对FHB具有高水平的抗性。六倍体wheat-T。携带3G染色体短臂片段(Chr3G)的timopheevii渗入系在喷雾接种后表现出高水平的FHB抗性。对这些渗入系的进一步分析表明,Chr3G片段具有强大的II型抗性,同时提高了籽粒重量保持率,减少了籽粒中脱氧雪腐镰梨醇(DON)的积累。这些结果表明,抗Chr3G有可能显著降低小麦品种对FHB的敏感性和籽粒DON的积累。Chr7At片段渗入Chr7A短臂也增强了II型FHB抗性。
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引用次数: 0
Cultivation practices and soil water storage effects on grain yield and quality of winter wheat in the Loess Plateau, China. 黄土高原栽培方式和土壤水分储存对冬小麦产量和品质的影响
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-23 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1735429
Pengcheng Ding, Hafeez Noor, Xiaofen Li, Jun Xing, Yongqiang Yan, Wendi Guo, Aixia Ren, Linghong Li, Yongkang Ren, Min Sun, Zhiqiang Gao

Introduction: In the water-limited Loess Plateau of China, wheat productivity faces severe constraints. This study investigates the physiological and quality determinants of yield and protein content across multiple winter wheat cultivars to identify key breeding targets for dryland systems.

Methods: Eleven cultivars were analyzed for soil water storage dynamics, dry matter accumulation and translocation, nitrogen use efficiency, and grain quality parameters, including volatile flavor compounds.

Results: High yield potential was driven by superior pre-anthesis nitrogen assimilation and substantial post-anthesis dry matter remobilization. The highest-yielding cultivar (YH-805) achieved this through a greater number of grains per spike. Conversely, higher grain protein content (e.g., in YH-618) was linked to enhanced post-flowering nitrogen translocation. A fundamental yield-protein trade-off was confirmed. The medium-yield, high-protein cultivar YH-115 exhibited the most favorable flavor profile, associated with key volatile compounds like octanal and hexanal.

Discussion: The results demonstrate that yield and quality are governed by distinct pre- and post-anthesis resource allocation strategies. Targeted breeding for specific traits-such as pre-anthesis nitrogen uptake for yield or post-anthesis nitrogen translocation for protein-can help optimize for either enhanced productivity or superior end-use quality in dryland wheat systems.

在水资源有限的黄土高原,小麦生产面临严重制约。本研究研究了多个冬小麦品种产量和蛋白质含量的生理和品质决定因素,以确定旱地系统的关键育种目标。方法:对11个栽培品种的土壤水分储存动态、干物质积累与转运、氮素利用效率和籽粒挥发性风味物质等品质参数进行分析。结果:花前氮同化和花后干物质再动员促进了高产潜力。产量最高的品种(YH-805)通过每穗更多的粒数实现了这一点。相反,较高的籽粒蛋白质含量(如YH-618)与花后氮转运增加有关。一个基本的产量-蛋白质权衡得到了证实。中产量、高蛋白品种YH-115表现出最有利的风味特征,与辛醛和己醛等关键挥发性化合物有关。讨论:结果表明,产量和质量受不同的花前和花后资源分配策略的支配。对特定性状(如花前氮素吸收对产量的影响或花后氮素转运对蛋白质的影响)进行有针对性的育种,可以帮助优化旱地小麦系统提高生产力或提高最终使用质量。
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引用次数: 0
Comparative analysis of morphological traits and photosynthetic parameters as well as carbon accumulation characteristics of six typical shrub species in the Qilian Mountains. 祁连山6种典型灌木形态特征、光合参数及碳积累特征比较分析
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-22 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1729429
Rong Zhou, Na Wei, Yaoyao Shangguan, Hu Zhao, Bin Chen, Yin Miao, Hongmei Liu, Xiaobin Xie, Gang Chen, Jingzhong Zhao, Dong Lv
<p><strong>Introduction: </strong>Shrubs are key components of arid ecosystems, and their functional traits directly influence ecological adaptability and productivity. Current research pays insufficient attention to the synergistic relationship between the overall morphological structure and leaf physiological functions of shrubs. This study focused on six typical shrub species in the arid zone of the Qilian Mountains, aiming to analyze interspecific differences in functional strategies from a "morphology-photosynthesis" synergy perspective.</p><p><strong>Methods: </strong>We selected six typical shrub species (e.g., <i>Cotoneaster multiflorus, Prunus pedunculata, Caragana arborescens</i>, and <i>Lonicera rupicola</i>) and comprehensively measured their morphological traits (plant height, basal diameter, root length, biomass allocation, etc.) and photosynthetic physiological parameters (net photosynthetic rate, transpiration rate, stomatal conductance, etc.).</p><p><strong>Results: </strong>The results showed that: (1) Morphologically, <i>C. arborescens</i> exhibited significantly greater plant height (205.17 cm) and whole-plant dry weight (303.03 g), while <i>L. rupicola</i> had deeper root systems (>40 cm); (2) Photosynthetically, the diurnal net photosynthetic rate displayed unimodal and bimodal patterns, primarily driven by photosynthetically active radiation, with <i>L. rupicola</i> and <i>C. arborescens</i> showing the highest estimated daily leaf-level carbon assimilation potential (6.93 and 5.86 g·m⁻²·d⁻¹, respectively); (3) A "scale decoupling" existed between whole-plant carbon storage capacity and leaf-level carbon assimilation potential: <i>C. arborescens</i> had the highest whole-plant carbon storage (120.86 g/plant) but not the highest per-unit-leaf-area assimilation efficiency, whereas <i>L. rupicola</i> exhibited high leaf-level efficiency but moderate whole-plant storage; (4) The six shrubs were classified into three strategic types based on biomass allocation and carbon storage: <i>C. arborescens</i> as "high-accumulation, stem-dominated"; <i>C. multiflorus, Lonicera ferdinandi, P. pedunculata, L. rupicola</i> as "balanced investment"; <i>Euonymus phellomanus</i> as "conservative, belowground-investment".</p><p><strong>Discussion: </strong>By integrating leaf-scale carbon assimilation potential estimates with whole-plant carbon storage measurements, this study systematically revealed the scale-decoupling phenomenon and established a more rigorous framework for assessing shrub carbon sinks. The findings demonstrate significant diversity in the synergistic differentiation of morphological and photosynthetic traits as well as carbon accumulation strategies among arid-zone shrubs. Vegetation restoration should select corresponding functional species based on objectives such as rapid carbon accumulation or stress adaptation, providing theoretical support and practical guidance for ecological restoration and carbon sink enhancement i
灌木是干旱生态系统的重要组成部分,其功能性状直接影响着生态适应性和生产力。目前的研究对灌木整体形态结构与叶片生理功能之间的协同关系关注不足。以祁连山干旱区6种典型灌木为研究对象,从“形态-光合”协同视角分析其功能策略的种间差异。方法:选取6种典型灌木(多花棉、长柄李、柠条、金银花),对其形态特征(株高、基径、根长、生物量分配等)和光合生理参数(净光合速率、蒸腾速率、气孔导度等)进行综合测定。结果:结果表明:(1)在形态上,杉木的株高(205.17 cm)和全株干重(303.03 g)显著高于杉木,而芦花的根系较深(约40 cm);(2)在光合作用方面,日净光合速率表现为单峰和双峰模式,主要受光合有效辐射的驱动,其中紫杉树和杉树显示出最高的日叶片碳同化电位(分别为6.93和5.86 g·m⁻²·d⁻¹);(3)全株碳储量与叶片碳同化潜力之间存在“尺度解耦合”关系:杉木的全株碳储量最高(120.86 g/株),但单位叶面积碳同化效率不高;(4)根据生物量分配和碳储量,将6种灌木划分为3种策略类型:乔木(C. arborescens)为“高积累、茎为主”;作为“平衡投资”的多花金银花、费迪南金银花、长柄金银花、金银花;卫矛为“保守、地下投资”。本研究通过整合叶片尺度的碳同化潜力估算和全株碳储量测量,系统地揭示了尺度解耦现象,并建立了一个更严格的灌木碳汇评估框架。研究结果表明,干旱区灌木在形态和光合性状的协同分化以及碳积累策略方面存在显著差异。植被恢复应基于快速碳积累或适应胁迫等目标选择相应的功能物种,为干旱区生态恢复和碳汇增强提供理论支持和实践指导。
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引用次数: 0
PalmNeXt: a ConvNeXt-based deep learning model for pest detection in date palm leaves. PalmNeXt:一个基于convnext的深度学习模型,用于检测枣椰叶中的害虫。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-22 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1738129
Mahmood Ashraf, Muhammad Zeeshan Aslam, Natasha Saeed, Syed Jawad Hussain

Automated pest detection is essential for timely and accurate crop monitoring, yet many existing approaches rely on manual inspection or computationally heavy models that struggle with small and variable datasets. To address these challenges, we introduce an enhanced ConvNeXt-Tiny-based framework that incorporates a tailored preprocessing pipeline to improve feature quality and overall performance. The model is evaluated on an RGB image dataset of 3,000 date palm leaf samples across four classes (Bug, Dubas, Healthy, Honey). Its performance is compared against two custom baselines, CNN-Attention and ResNet13-Attention, as well as state-of-the-art models including ViT, ECA-Net, and the standard ConvNeXt-Tiny. Experimental results show that our preprocessing-augmented ConvNeXt-Tiny achieves the highest accuracy, precision, recall, and F1-score, outperforming both custom and state-of-the-art baselines. These findings demonstrate the effectiveness of the proposed lightweight solution for scalable and high-accuracy pest detection in precision agriculture.

自动害虫检测对于及时和准确的作物监测至关重要,但许多现有方法依赖于人工检查或计算量大的模型,这些模型难以处理小而可变的数据集。为了应对这些挑战,我们引入了一个增强的基于convnext - tiny的框架,该框架结合了定制的预处理管道,以提高特征质量和整体性能。该模型在四个类别(Bug, Dubas, Healthy, Honey)的3,000个枣椰叶样本的RGB图像数据集上进行评估。它的性能与两个自定义基线,CNN-Attention和ResNet13-Attention,以及最先进的模型,包括ViT, ECA-Net和标准的ConvNeXt-Tiny进行比较。实验结果表明,我们的预处理增强的ConvNeXt-Tiny达到了最高的准确率、精密度、召回率和f1分数,优于自定义和最先进的基线。这些发现证明了所提出的轻量级解决方案在精准农业中可扩展和高精度害虫检测的有效性。
{"title":"PalmNeXt: a ConvNeXt-based deep learning model for pest detection in date palm leaves.","authors":"Mahmood Ashraf, Muhammad Zeeshan Aslam, Natasha Saeed, Syed Jawad Hussain","doi":"10.3389/fpls.2025.1738129","DOIUrl":"https://doi.org/10.3389/fpls.2025.1738129","url":null,"abstract":"<p><p>Automated pest detection is essential for timely and accurate crop monitoring, yet many existing approaches rely on manual inspection or computationally heavy models that struggle with small and variable datasets. To address these challenges, we introduce an enhanced ConvNeXt-Tiny-based framework that incorporates a tailored preprocessing pipeline to improve feature quality and overall performance. The model is evaluated on an RGB image dataset of 3,000 date palm leaf samples across four classes (Bug, Dubas, Healthy, Honey). Its performance is compared against two custom baselines, CNN-Attention and ResNet13-Attention, as well as state-of-the-art models including ViT, ECA-Net, and the standard ConvNeXt-Tiny. Experimental results show that our preprocessing-augmented ConvNeXt-Tiny achieves the highest accuracy, precision, recall, and F1-score, outperforming both custom and state-of-the-art baselines. These findings demonstrate the effectiveness of the proposed lightweight solution for scalable and high-accuracy pest detection in precision agriculture.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"16 ","pages":"1738129"},"PeriodicalIF":4.1,"publicationDate":"2026-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12872870/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146142105","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Frontiers in Plant Science
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