An accurate and trustworthy deep learning approach for bladder tumor segmentation with uncertainty estimation

IF 4.9 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer methods and programs in biomedicine Pub Date : 2025-02-10 DOI:10.1016/j.cmpb.2025.108645
Jie Xu , Haixin Wang , Min Lu , Hai Bi , Deng Li , Zixuan Xue , Qi Zhang
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引用次数: 0

Abstract

Background and Objective: Although deep learning-based intelligent diagnosis of bladder cancer has achieved excellent performance, the reliability of neural network predicted results may not be evaluated. This study aims to explore a trustworthy AI-based tumor segmentation model, which not only outputs predicted results but also provides confidence information about the predictions.
Methods: This paper proposes a novel model for bladder tumor segmentation with uncertainty estimation (BSU), which is not merely able to effectively segment the lesion area but also yields an uncertainty map showing the confidence information of the segmentation results. In contrast to previous uncertainty estimation, we utilize test time augmentation (TTA) and test time dropout (TTD) to estimate aleatoric uncertainty and epistemic uncertainty in both internal and external datasets to explore the effects of both uncertainties on different datasets.
Results: Our BSU model achieved the Dice coefficients of 0.766 and 0.848 on internal and external cystoscopy datasets, respectively, along with accuracy of 0.950 and 0.954. Compared to the state-of-the-art methods, our BSU model demonstrated superior performance, which was further validated by the statistically significance of the t-tests at the conventional level. Clinical experiments verified the practical value of uncertainty estimation in real-world bladder cancer diagnostics.
Conclusions: The proposed BSU model is able to visualize the confidence of the segmentation results, serving as a valuable addition for assisting urologists in enhancing both the precision and efficiency of bladder cancer diagnoses in clinical practice.
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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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