An accurate and trustworthy deep learning approach for bladder tumor segmentation with uncertainty estimation

IF 4.8 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer methods and programs in biomedicine Pub Date : 2025-05-01 Epub Date: 2025-02-10 DOI:10.1016/j.cmpb.2025.108645
Jie Xu , Haixin Wang , Min Lu , Hai Bi , Deng Li , Zixuan Xue , Qi Zhang
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Abstract

Background and Objective: Although deep learning-based intelligent diagnosis of bladder cancer has achieved excellent performance, the reliability of neural network predicted results may not be evaluated. This study aims to explore a trustworthy AI-based tumor segmentation model, which not only outputs predicted results but also provides confidence information about the predictions.
Methods: This paper proposes a novel model for bladder tumor segmentation with uncertainty estimation (BSU), which is not merely able to effectively segment the lesion area but also yields an uncertainty map showing the confidence information of the segmentation results. In contrast to previous uncertainty estimation, we utilize test time augmentation (TTA) and test time dropout (TTD) to estimate aleatoric uncertainty and epistemic uncertainty in both internal and external datasets to explore the effects of both uncertainties on different datasets.
Results: Our BSU model achieved the Dice coefficients of 0.766 and 0.848 on internal and external cystoscopy datasets, respectively, along with accuracy of 0.950 and 0.954. Compared to the state-of-the-art methods, our BSU model demonstrated superior performance, which was further validated by the statistically significance of the t-tests at the conventional level. Clinical experiments verified the practical value of uncertainty estimation in real-world bladder cancer diagnostics.
Conclusions: The proposed BSU model is able to visualize the confidence of the segmentation results, serving as a valuable addition for assisting urologists in enhancing both the precision and efficiency of bladder cancer diagnoses in clinical practice.
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基于不确定性估计的膀胱肿瘤深度学习分割方法
背景与目的:虽然基于深度学习的膀胱癌智能诊断已经取得了优异的成绩,但神经网络预测结果的可靠性还有待评估。本研究旨在探索一种可信的基于人工智能的肿瘤分割模型,该模型不仅输出预测结果,而且提供预测的置信度信息。方法:本文提出了一种新的基于不确定性估计的膀胱肿瘤分割模型,该模型不仅能够有效分割病变区域,而且能够生成显示分割结果置信度信息的不确定性图。与以往的不确定性估计相比,我们利用测试时间增强(TTA)和测试时间dropout (TTD)来估计内部和外部数据集的任意不确定性和认知不确定性,以探索这两种不确定性对不同数据集的影响。结果:BSU模型在内外膀胱镜数据集上的Dice系数分别为0.766和0.848,准确率分别为0.950和0.954。与最先进的方法相比,我们的BSU模型表现出优越的性能,t检验在常规水平上的统计显著性进一步验证了这一点。临床实验验证了不确定度估计在实际膀胱癌诊断中的实用价值。结论:所提出的BSU模型能够可视化分割结果的置信度,为辅助泌尿科医生在临床实践中提高膀胱癌诊断的准确性和效率提供了有价值的补充。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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