Two new aggreceride derivatives and other chemical constituents from the stems of Tarenna conferta Benth and their potential antileishmanial activity against Leishmania donovani promastigotes: Insight from molecular docking analysis

IF 2 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemical Systematics and Ecology Pub Date : 2025-02-24 DOI:10.1016/j.bse.2025.104990
Raïssa Carelle Dzukoug , Angelique Nicolas Messi , Rostanie Dongmo Zeukang , Susan Lucia Bonnet , Anke Wilhelm , Denis-Gregoire Tene , Xavier Siwe-Noundou , Abderaman Bintou Souham , Karel Grobler von Eschwege , Alex de Theodore Atchade , Joséphine Ngo Mbing , Dieudonné Emmanuel Pegnyemb , Anastasie Ewola Tih , Raphaël Tih Ghogomu , Muhammad Iqbal Choudhary
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Abstract

Tarenna conferta Benth is traditionally used to treat fever, headaches, parasitic and skin diseases. The aim of this study was to identify potential antileishmanial bioactive compounds from T. conferta and in silico studies against target receptors (2JK6 and 2W0H). The performance of successive chromatographic techniques followed by characterization using NMR (1D and 2D) as well as HR-ESIMS analyses, of methylene choride fraction of the stems of T. conferta, led to the identification of two unprecedented derivatives i.e. a new derivative of a dicarboxylic acid (1) and a new hydroxy ester derivative (2), with seven known compounds 3, 4, 5, 6, 7, 8 and 9. Compounds 1, 3 and 4 displayed highly potent antileishmanial activity against Leishmania donovani promastigotes with IC50 values of 3.586 ± 0.554 μg/mL, 0.154 ± 0.8123 μg/mL and 0.789 ± 0.105 μg/mL respectively, compared to amphotericine B (IC50 = 0.198 ± 0.704 μM), used as positive control. However crude extract exhibited significant antileishmanial activity against L. donovani (MHOM/SD/62/1S) promastigotes (IC50 56.860 ± 1.755 μg/mL) and showed no cytotoxicity on RAW 264.7 macrophage cells. The molecular docking provides a captivating glimpse into the intricate interactions between compounds 1, 2, 3, and 4 and the target receptors (2JK6 and 2W0H). The results revealed that, compounds 1, 3, and 4 consistently displayed strong binding affinities and hydrogen bond interactions, showcasing their potential for effective therapeutic interventions. Compounds 2 and 3 exhibit moderate binding affinities with essential amino acids. In terms of potential drug development, compound 4 emerges as a standout candidate due to its exceptionally high binding affinities and specific interactions.
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两种新的聚脲类衍生物和其他化学成分的分子对接分析及其对多诺瓦利什曼原虫的潜在抗利什曼活性
传统上用于治疗发烧、头痛、寄生虫病和皮肤病。本研究的目的是从T. conferta中鉴定潜在的抗利什曼原虫生物活性化合物,并对靶受体(2JK6和2W0H)进行了计算机研究。利用NMR (1D和2D)和HR-ESIMS分析,连续色谱技术的性能导致鉴定出两个前所未有的衍生物,即一个新的二羧酸衍生物(1)和一个新的羟基酯衍生物(2),七个已知化合物3,4,5,6,7,8和9。与阳性对照两性霉素B (IC50 = 0.198±0.704 μM)相比,化合物1、3、4对多诺瓦利什曼原虫具有较强的抗利什曼原虫活性,IC50值分别为3.586±0.554 μg/mL、0.154±0.8123 μg/mL和0.789±0.105 μg/mL。粗提物对多诺瓦氏L. (MHOM/SD/62/1S) promastigotes具有显著的抗利什曼原虫活性(IC50为56.860±1.755 μg/mL),对RAW 264.7巨噬细胞无细胞毒性。分子对接为化合物1、2、3和4与靶受体(2JK6和2W0H)之间复杂的相互作用提供了一个迷人的一瞥。结果表明,化合物1、3和4均表现出较强的结合亲和力和氢键相互作用,显示出它们具有有效治疗干预的潜力。化合物2和3与必需氨基酸具有中等的结合亲和力。在潜在的药物开发方面,化合物4由于其异常高的结合亲和力和特异性相互作用而成为一个突出的候选者。
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来源期刊
Biochemical Systematics and Ecology
Biochemical Systematics and Ecology 生物-进化生物学
CiteScore
3.00
自引率
12.50%
发文量
147
审稿时长
43 days
期刊介绍: Biochemical Systematics and Ecology is devoted to the publication of original papers and reviews, both submitted and invited, in two subject areas: I) the application of biochemistry to problems relating to systematic biology of organisms (biochemical systematics); II) the role of biochemistry in interactions between organisms or between an organism and its environment (biochemical ecology). In the Biochemical Systematics subject area, comparative studies of the distribution of (secondary) metabolites within a wider taxon (e.g. genus or family) are welcome. Comparative studies, encompassing multiple accessions of each of the taxa within their distribution are particularly encouraged. Welcome are also studies combining classical chemosystematic studies (such as comparative HPLC-MS or GC-MS investigations) with (macro-) molecular phylogenetic studies. Studies that involve the comparative use of compounds to help differentiate among species such as adulterants or substitutes that illustrate the applied use of chemosystematics are welcome. In contrast, studies solely employing macromolecular phylogenetic techniques (gene sequences, RAPD studies etc.) will be considered out of scope. Discouraged are manuscripts that report known or new compounds from a single source taxon without addressing a systematic hypothesis. Also considered out of scope are studies using outdated and hard to reproduce macromolecular techniques such as RAPDs in combination with standard chemosystematic techniques such as GC-FID and GC-MS.
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