Vinayak Prathikanti, Renee Casentini, Jonathan Hwang, Amza Abdou, Nassirou Beidou, Boubacar Kadri, Ariktha Srivathsan, Isabelle Prieto, Winnie Huang, Daniel G Eyassu, Elisabeth Gebreegziabher, Corinne Pierce, Hadley Burroughs, Jeremy D Keenan, Thomas M Lietman
{"title":"Identifying Borderline Trachoma Grades Using a Three-Latent Class Model.","authors":"Vinayak Prathikanti, Renee Casentini, Jonathan Hwang, Amza Abdou, Nassirou Beidou, Boubacar Kadri, Ariktha Srivathsan, Isabelle Prieto, Winnie Huang, Daniel G Eyassu, Elisabeth Gebreegziabher, Corinne Pierce, Hadley Burroughs, Jeremy D Keenan, Thomas M Lietman","doi":"10.4269/ajtmh.24-0321","DOIUrl":null,"url":null,"abstract":"<p><p>The WHO has a simplified grading system for assessing trachoma. However, even for experts, it can be difficult to classify certain cases as strictly positive or negative for a given grade. Given the absence of a true gold standard, we performed a Latent Class Analysis (LCA) on a set of 200 graded photos of the superior tarsal conjunctiva. Ten trained graders assessed the presence of two trachoma grades: trachomatous inflammation-follicular (TF) and trachomatous inflammation-intense (TI). The LCA was modeled in two different ways: first with two classes (presence/absence), and then with three classes, with the extra class presumed to represent a more discrepant \"borderline\" case. Cohen's κ-statistics measuring agreement between graders were calculated for TF and TI grades (separately) before and after removing the third latent class. The κ-statistic increased by 0.10 (95% CI = 0.72-0.85; P <0.001) for TF and 0.13 (95% CI = 0.81-0.90; P <0.001) for TI, indicating that the third latent class represented a discrepant-case borderline class. The identification of borderline grading cases using a three-class LCA may be useful in creating balanced grader certification examinations that represent the full spectrum of disease. Additionally, a multiclass LCA could act as a probabilistic gold standard used to train and analyze future convolutional neural network models.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":" ","pages":"1087-1090"},"PeriodicalIF":1.6000,"publicationDate":"2025-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12062694/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"American Journal of Tropical Medicine and Hygiene","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.4269/ajtmh.24-0321","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/5/7 0:00:00","PubModel":"Print","JCR":"Q3","JCRName":"PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH","Score":null,"Total":0}
引用次数: 0
Abstract
The WHO has a simplified grading system for assessing trachoma. However, even for experts, it can be difficult to classify certain cases as strictly positive or negative for a given grade. Given the absence of a true gold standard, we performed a Latent Class Analysis (LCA) on a set of 200 graded photos of the superior tarsal conjunctiva. Ten trained graders assessed the presence of two trachoma grades: trachomatous inflammation-follicular (TF) and trachomatous inflammation-intense (TI). The LCA was modeled in two different ways: first with two classes (presence/absence), and then with three classes, with the extra class presumed to represent a more discrepant "borderline" case. Cohen's κ-statistics measuring agreement between graders were calculated for TF and TI grades (separately) before and after removing the third latent class. The κ-statistic increased by 0.10 (95% CI = 0.72-0.85; P <0.001) for TF and 0.13 (95% CI = 0.81-0.90; P <0.001) for TI, indicating that the third latent class represented a discrepant-case borderline class. The identification of borderline grading cases using a three-class LCA may be useful in creating balanced grader certification examinations that represent the full spectrum of disease. Additionally, a multiclass LCA could act as a probabilistic gold standard used to train and analyze future convolutional neural network models.
世卫组织有一个评估沙眼的简化分级系统。然而,即使对于专家来说,对于给定的分数,也很难将某些案例严格归类为阳性或阴性。由于缺乏真正的黄金标准,我们对一组200张分级的跗骨上结膜照片进行了潜在分类分析(LCA)。10名训练有素的评分员评估了两种沙眼级别的存在:沙眼炎症-滤泡性(TF)和沙眼炎症-强烈性(TI)。LCA以两种不同的方式建模:首先是两个类(存在/不存在),然后是三个类,假定额外的类代表更不一致的“边界”情况。在去除第三个潜在类别之前和之后,分别计算TF和TI评分之间的科恩κ统计量测量一致性。κ-统计量增加0.10 (95% CI = 0.72-0.85;P
期刊介绍:
The American Journal of Tropical Medicine and Hygiene, established in 1921, is published monthly by the American Society of Tropical Medicine and Hygiene. It is among the top-ranked tropical medicine journals in the world publishing original scientific articles and the latest science covering new research with an emphasis on population, clinical and laboratory science and the application of technology in the fields of tropical medicine, parasitology, immunology, infectious diseases, epidemiology, basic and molecular biology, virology and international medicine.
The Journal publishes unsolicited peer-reviewed manuscripts, review articles, short reports, images in Clinical Tropical Medicine, case studies, reports on the efficacy of new drugs and methods of treatment, prevention and control methodologies,new testing methods and equipment, book reports and Letters to the Editor. Topics range from applied epidemiology in such relevant areas as AIDS to the molecular biology of vaccine development.
The Journal is of interest to epidemiologists, parasitologists, virologists, clinicians, entomologists and public health officials who are concerned with health issues of the tropics, developing nations and emerging infectious diseases. Major granting institutions including philanthropic and governmental institutions active in the public health field, and medical and scientific libraries throughout the world purchase the Journal.
Two or more supplements to the Journal on topics of special interest are published annually. These supplements represent comprehensive and multidisciplinary discussions of issues of concern to tropical disease specialists and health issues of developing countries