M Fausta Dutuze, Analise Espino, Rebecca C Christofferson
Rural Rwandan communities face health challenges for humans and animals, and the topography and climate of the Kirehe District of Rwanda put farmers at high risk for mosquito-borne diseases. Individuals from 92 Rwandan farms were surveyed about farm practices, as well as animal and human health histories between December 2017 and February 2018. Human, animal, and environmental factors were investigated to determine whether there is a pattern of risk for abortion incidence and/or history of malarial disease on the farm. Iterative, complementary logistic regression models were used to determine whether there was an association between variables and abortion history in animals. These factors were then used to investigate association with a reported history of malaria. Of the 92 farms in our study, 82 were family farms and 10 were commercial farms. On average, 88% of the farms had cattle, and 30% of farms had experienced a cattle abortion in the past 2 years. There was no observed statistical significance in the risk factors for history of abortion in cattle and the measured variables. Using One Health as a guiding framework, we sought to determine whether human, animal, and environmental factors were statistically associated with observed disease outcomes. From our study of the practices of the farmers with respect to biosafety and self-protection against disease, we have identified potential sources of risk that could be targeted to enhance education and protection on these farms.
{"title":"Assessment of Risk Factors Associated with and Practices of Cattle Farmers in Kirehe District Rwanda with Respect to Vector-Borne and Zoonotic Pathogens.","authors":"M Fausta Dutuze, Analise Espino, Rebecca C Christofferson","doi":"10.4269/ajtmh.24-0099","DOIUrl":"https://doi.org/10.4269/ajtmh.24-0099","url":null,"abstract":"<p><p>Rural Rwandan communities face health challenges for humans and animals, and the topography and climate of the Kirehe District of Rwanda put farmers at high risk for mosquito-borne diseases. Individuals from 92 Rwandan farms were surveyed about farm practices, as well as animal and human health histories between December 2017 and February 2018. Human, animal, and environmental factors were investigated to determine whether there is a pattern of risk for abortion incidence and/or history of malarial disease on the farm. Iterative, complementary logistic regression models were used to determine whether there was an association between variables and abortion history in animals. These factors were then used to investigate association with a reported history of malaria. Of the 92 farms in our study, 82 were family farms and 10 were commercial farms. On average, 88% of the farms had cattle, and 30% of farms had experienced a cattle abortion in the past 2 years. There was no observed statistical significance in the risk factors for history of abortion in cattle and the measured variables. Using One Health as a guiding framework, we sought to determine whether human, animal, and environmental factors were statistically associated with observed disease outcomes. From our study of the practices of the farmers with respect to biosafety and self-protection against disease, we have identified potential sources of risk that could be targeted to enhance education and protection on these farms.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142279198","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sean Yanik, Hang Yu, Nattawat Chaiyawong, Opeoluwa Adewale-Fasoro, Luciana Ribeiro Dinis, Ravi Kumar Narayanasamy, Elizabeth C Lee, Ariel Lubonja, Bowen Li, Stefan Jaeger, Prakash Srinivasan
Rodent malaria models serve as important preclinical antimalarial and vaccine testing tools. Evaluating treatment outcomes in these models often requires manually counting parasite-infected red blood cells (iRBCs), a time-consuming process, which can be inconsistent between individuals and laboratories. We have developed an easy-to-use machine learning (ML)-based software, Malaria Screener R, to expedite and standardize such studies by automating the counting of Plasmodium iRBCs in rodents. This software can process Giemsa-stained blood smear images captured by any camera-equipped microscope. It features an intuitive graphical user interface that facilitates image processing and visualization of the results. The software has been developed as a desktop application that processes images on standard Windows and MacOS computers. A previous ML model created by the authors designed to count Plasmodium falciparum-infected human RBCs did not perform well counting Plasmodium-infected mouse RBCs. We leveraged that model by loading the pretrained weights and training the algorithm with newly collected data to target Plasmodium yoelii- and Plasmodium berghei-infected mouse RBCs. This new model reliably measured both P. yoelii and P. berghei parasitemia (R2 = 0.9916). Additional rounds of training data to incorporate variances due to length of Giemsa staining and type of microscopes, etc., have produced a generalizable model, meeting WHO competency level 1 for the subcategory of parasite counting using independent microscopes. Reliable, automated analyses of blood-stage parasitemia will facilitate rapid and consistent evaluation of novel vaccines and antimalarials across laboratories in an easily accessible in vivo malaria model.
啮齿类疟疾模型是重要的临床前抗疟和疫苗测试工具。在这些模型中评估治疗效果通常需要人工计数受寄生虫感染的红细胞(iRBCs),这是一个耗时的过程,而且不同个体和实验室的计数结果可能不一致。我们开发了一种基于机器学习 (ML) 的易用软件 Malaria Screener R,通过自动计数啮齿动物体内的疟原虫 iRBC,加快了此类研究的进度并实现了标准化。该软件可以处理任何配备照相机的显微镜拍摄的吉氏染色血涂片图像。它具有直观的图形用户界面,便于图像处理和结果可视化。该软件是作为桌面应用程序开发的,可在标准的 Windows 和 MacOS 计算机上处理图像。作者之前创建的一个 ML 模型专门用于计算感染恶性疟原虫的人类红细胞,但在计算感染疟原虫的小鼠红细胞时表现不佳。我们利用该模型,加载了预训练的权重,并用新收集的数据对算法进行了训练,以计算受尤利疟原虫和伯热疟原虫感染的小鼠红细胞。这一新模型可靠地测量了尤利疟原虫和贝氏疟原虫寄生虫血症(R2 = 0.9916)。在使用独立显微镜进行寄生虫计数的子类别中,该模型达到了世卫组织能力级别 1。可靠的血期寄生虫血症自动分析将有助于各实验室在易于获取的体内疟疾模型中对新型疫苗和抗疟药物进行快速、一致的评估。
{"title":"Application of Machine Learning in a Rodent Malaria Model for Rapid, Accurate, and Consistent Parasite Counts.","authors":"Sean Yanik, Hang Yu, Nattawat Chaiyawong, Opeoluwa Adewale-Fasoro, Luciana Ribeiro Dinis, Ravi Kumar Narayanasamy, Elizabeth C Lee, Ariel Lubonja, Bowen Li, Stefan Jaeger, Prakash Srinivasan","doi":"10.4269/ajtmh.24-0135","DOIUrl":"10.4269/ajtmh.24-0135","url":null,"abstract":"<p><p>Rodent malaria models serve as important preclinical antimalarial and vaccine testing tools. Evaluating treatment outcomes in these models often requires manually counting parasite-infected red blood cells (iRBCs), a time-consuming process, which can be inconsistent between individuals and laboratories. We have developed an easy-to-use machine learning (ML)-based software, Malaria Screener R, to expedite and standardize such studies by automating the counting of Plasmodium iRBCs in rodents. This software can process Giemsa-stained blood smear images captured by any camera-equipped microscope. It features an intuitive graphical user interface that facilitates image processing and visualization of the results. The software has been developed as a desktop application that processes images on standard Windows and MacOS computers. A previous ML model created by the authors designed to count Plasmodium falciparum-infected human RBCs did not perform well counting Plasmodium-infected mouse RBCs. We leveraged that model by loading the pretrained weights and training the algorithm with newly collected data to target Plasmodium yoelii- and Plasmodium berghei-infected mouse RBCs. This new model reliably measured both P. yoelii and P. berghei parasitemia (R2 = 0.9916). Additional rounds of training data to incorporate variances due to length of Giemsa staining and type of microscopes, etc., have produced a generalizable model, meeting WHO competency level 1 for the subcategory of parasite counting using independent microscopes. Reliable, automated analyses of blood-stage parasitemia will facilitate rapid and consistent evaluation of novel vaccines and antimalarials across laboratories in an easily accessible in vivo malaria model.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142279197","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mirjam Kaestli, Saika Farook, Md Shariful Alam Jilani, Shaheda Anwar, Tanvir Ahmed Siddiqui, Mark Mayo, Yuwana Podin, Jessica R Webb, David A B Dance, Bart J Currie
Melioidosis is an emerging tropical infectious disease with a rising global burden caused by the environmental bacterium Burkholderia pseudomallei. It is endemic in Southeast and South Asia, including Bangladesh. A rare aminoglycoside-susceptible B. pseudomallei isolate (Y2019) has recently been reported from a melioidosis patient in Dhaka, Bangladesh. To understand the geographical origins of Y2019, we subjected it and 10 other isolates from Bangladesh to whole-genome sequencing. In a phylogenetic tree with a global set of B. pseudomallei genomes, most Bangladeshi genomes clustered tightly within the Asian clade. In contrast, Y2019 was closely related to ST881 isolates from Sarawak, Malaysian Borneo, a gentamicin-sensitive sequence type, suggesting infection in Borneo. Y2019 also contained the same gentamicin sensitivity conferring nonsynonymous mutation in the drug efflux pump encoding the amrB gene. In the absence of a full travel history, whole-genome sequencing and bioinformatics tools have revealed the likely origin of this rare isolate.
{"title":"Use of Comparative Genomics To Resolve an Unusual Case of Aminoglycoside Susceptibility in the Melioidosis Pathogen Burkholderia pseudomallei in Bangladesh.","authors":"Mirjam Kaestli, Saika Farook, Md Shariful Alam Jilani, Shaheda Anwar, Tanvir Ahmed Siddiqui, Mark Mayo, Yuwana Podin, Jessica R Webb, David A B Dance, Bart J Currie","doi":"10.4269/ajtmh.24-0144","DOIUrl":"10.4269/ajtmh.24-0144","url":null,"abstract":"<p><p>Melioidosis is an emerging tropical infectious disease with a rising global burden caused by the environmental bacterium Burkholderia pseudomallei. It is endemic in Southeast and South Asia, including Bangladesh. A rare aminoglycoside-susceptible B. pseudomallei isolate (Y2019) has recently been reported from a melioidosis patient in Dhaka, Bangladesh. To understand the geographical origins of Y2019, we subjected it and 10 other isolates from Bangladesh to whole-genome sequencing. In a phylogenetic tree with a global set of B. pseudomallei genomes, most Bangladeshi genomes clustered tightly within the Asian clade. In contrast, Y2019 was closely related to ST881 isolates from Sarawak, Malaysian Borneo, a gentamicin-sensitive sequence type, suggesting infection in Borneo. Y2019 also contained the same gentamicin sensitivity conferring nonsynonymous mutation in the drug efflux pump encoding the amrB gene. In the absence of a full travel history, whole-genome sequencing and bioinformatics tools have revealed the likely origin of this rare isolate.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142124526","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Katherine O'Brien, Grace Kennedy, Hellen Nyakundi, Mwatela Kitondo, Valaria Pembee, Wilson Biwott, Richard Wamai
Visceral leishmaniasis (VL) is endemic in Baringo County, Kenya, and contributes significantly to the burden of disease in the region. Housing structures and other environmental risk factors contribute to transmission dynamics, but these have not been specifically studied in Baringo. The aim of this study was to increase understanding of VL transmission in the region through determining relationships between VL infection, housing, and other environmental factors. Data collection occurred from February 1 to May 31, 2023 at Chemolingot Sub-County Hospital and patients' homesteads via questionnaires of primary VL patients being treated and VL follow-up patients who were still residing in the same house as when the infection occurred. Factors assessed were housing structures, proximity to vector breeding and resting sites, and prevention and control measure practices. A baseline assessment of housing types was conducted through direct ethnographic observation and used in the analysis. Forty-one patients were included in the study. A χ2 analysis and Fisher's test were used to determine association between VL infection and housing materials, where VL patient housing data were compared with the regional baseline assessment. Significant associations with VL infection were found between mud and stick walls (P <0.001); mud walls (P <0.001); mud, stick, and grass combination walls (P = 0.02); and stick and grass walls (P <0.001). Behavior comparison showed that most VL-protective behaviors were practiced by follow-up patients after infection. Results showed an increased need for VL prevention focusing on environmental factors.
{"title":"Environmental Risk Factors for Visceral Leishmaniasis: An Analysis of Housing Types and Behavioral Factors in Baringo County, Kenya.","authors":"Katherine O'Brien, Grace Kennedy, Hellen Nyakundi, Mwatela Kitondo, Valaria Pembee, Wilson Biwott, Richard Wamai","doi":"10.4269/ajtmh.23-0781","DOIUrl":"10.4269/ajtmh.23-0781","url":null,"abstract":"<p><p>Visceral leishmaniasis (VL) is endemic in Baringo County, Kenya, and contributes significantly to the burden of disease in the region. Housing structures and other environmental risk factors contribute to transmission dynamics, but these have not been specifically studied in Baringo. The aim of this study was to increase understanding of VL transmission in the region through determining relationships between VL infection, housing, and other environmental factors. Data collection occurred from February 1 to May 31, 2023 at Chemolingot Sub-County Hospital and patients' homesteads via questionnaires of primary VL patients being treated and VL follow-up patients who were still residing in the same house as when the infection occurred. Factors assessed were housing structures, proximity to vector breeding and resting sites, and prevention and control measure practices. A baseline assessment of housing types was conducted through direct ethnographic observation and used in the analysis. Forty-one patients were included in the study. A χ2 analysis and Fisher's test were used to determine association between VL infection and housing materials, where VL patient housing data were compared with the regional baseline assessment. Significant associations with VL infection were found between mud and stick walls (P <0.001); mud walls (P <0.001); mud, stick, and grass combination walls (P = 0.02); and stick and grass walls (P <0.001). Behavior comparison showed that most VL-protective behaviors were practiced by follow-up patients after infection. Results showed an increased need for VL prevention focusing on environmental factors.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142124524","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A 4-year-old girl, previously treated with prednisolone and cyclosporin A due to autoimmune lymphoproliferative syndrome, presented with acute fever, progressive pancytopenia, intermittent abdominal pain, and acute episode of hematemesis. Esophagogastroduodenoscopy revealed diffuse erythematous gastric mucosa and blunt duodenal villi. Histopathology of the duodenal mucosa was notable for numerous acid-fast bacilli within foamy macrophages in the lamina propria, and nontuberculous Mycobacterium DNA was detected by polymerase chain reaction of duodenal tissue. Azithromycin, rifampicin, and ethambutol were started while waiting for species identification and drug susceptibility testing. Macrolide-resistant Mycobacterium intracellulare was demonstrated from blood culture, indicating disseminated infection. The patient died of overwhelming infection, despite receiving newly adjusted regimen (rifampicin, ethambutol, clofazimine, and amikacin). This case highlights the importance of considering disseminated Mycobacterium avium complex (MAC) in the differential diagnosis of immunocompromised, non-HIV patients presenting with gastrointestinal manifestations. Early identification of macrolide-resistant MAC is crucial for guiding appropriate treatment and potentially improve patient outcomes.
一名曾因自身免疫性淋巴细胞增生综合征接受过泼尼松龙和环孢素 A 治疗的 4 岁女孩,因急性发热、进行性泛发热、间歇性腹痛和急性吐血而就诊。食管胃十二指肠镜检查发现胃黏膜弥漫性红斑,十二指肠绒毛变钝。十二指肠粘膜组织病理学检查发现,固有层泡沫状巨噬细胞内有大量酸性粘液杆菌,十二指肠组织聚合酶链反应检测到非结核分枝杆菌DNA。患者开始服用阿奇霉素、利福平和乙胺丁醇,同时等待进行菌种鉴定和药敏试验。从血液培养中发现了耐大环内酯类药物的细胞内分枝杆菌,这表明感染已经扩散。尽管患者接受了新调整的治疗方案(利福平、乙胺丁醇、氯法齐明和阿米卡星),但仍死于严重感染。该病例强调了在对出现胃肠道表现的免疫力低下的非艾滋病毒患者进行鉴别诊断时考虑播散型复合分枝杆菌(MAC)的重要性。早期识别耐大环内酯类药物的 MAC 对于指导适当的治疗和改善患者预后至关重要。
{"title":"Disseminated Macrolide-Resistant Mycobacterium intracellulare Infection in a Child with Autoimmune Lymphoproliferative Disorder: A Case Report and Literature Review.","authors":"Phuwakrit Nithirungruang, Pornthep Tanpowpong, Songpon Getsuwan, Sophida Boonsathorn","doi":"10.4269/ajtmh.24-0076","DOIUrl":"10.4269/ajtmh.24-0076","url":null,"abstract":"<p><p>A 4-year-old girl, previously treated with prednisolone and cyclosporin A due to autoimmune lymphoproliferative syndrome, presented with acute fever, progressive pancytopenia, intermittent abdominal pain, and acute episode of hematemesis. Esophagogastroduodenoscopy revealed diffuse erythematous gastric mucosa and blunt duodenal villi. Histopathology of the duodenal mucosa was notable for numerous acid-fast bacilli within foamy macrophages in the lamina propria, and nontuberculous Mycobacterium DNA was detected by polymerase chain reaction of duodenal tissue. Azithromycin, rifampicin, and ethambutol were started while waiting for species identification and drug susceptibility testing. Macrolide-resistant Mycobacterium intracellulare was demonstrated from blood culture, indicating disseminated infection. The patient died of overwhelming infection, despite receiving newly adjusted regimen (rifampicin, ethambutol, clofazimine, and amikacin). This case highlights the importance of considering disseminated Mycobacterium avium complex (MAC) in the differential diagnosis of immunocompromised, non-HIV patients presenting with gastrointestinal manifestations. Early identification of macrolide-resistant MAC is crucial for guiding appropriate treatment and potentially improve patient outcomes.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142124523","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The COVID-19 pandemic has exerted a notable impact on worldwide health across diverse age groups. Although children and adolescents were initially considered less vulnerable, they have also shown susceptibility to the virus, emphasizing the importance of understanding associated risk factors. Epidemiological data reveal an increasing number of COVID-19 cases in this age group. The aim is to conduct a systematic assessment of the association between the level of vitamin D and COVID-19 infection in children and adolescents following Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) guidelines. A comprehensive literature search was performed across various databases up to October 7, 2023. Studies assessing laboratory-confirmed COVID-19 patients, the level of 25-hydroxyvitamin D in serum, and clinical outcomes were encompassed. Quality assessment was performed using the Newcastle-Ottawa Scale. Thirteen studies, conducted across six countries and involving 1,071 pediatric patients, were included. Vitamin D deficiency was prevalent among children and adolescents with COVID-19. Some studies suggested that vitamin D deficiency significantly increased the risk of COVID-19 infection and was linked to disease progression. Furthermore, deficiency in vitamin D demonstrated an association with increased levels of inflammatory markers, reduced lymphocyte counts, and heightened clinical symptoms, including fever and cough. Maintaining adequate vitamin D levels may be a crucial strategy for reducing COVID-19 severity and associated complications in children and adolescents. Nevertheless, there is a requirement for additional high-quality research to establish specific guidelines regarding vitamin D supplementation in this population amid the ongoing COVID-19 pandemic.
COVID-19 大流行对全球不同年龄段人群的健康产生了显著影响。虽然儿童和青少年最初被认为不太容易感染,但他们也表现出对病毒的易感性,这强调了了解相关风险因素的重要性。流行病学数据显示,这一年龄组的 COVID-19 病例数量不断增加。我们的目的是根据系统回顾和元分析首选报告项目(PRISMA)指南,对儿童和青少年的维生素 D 水平与 COVID-19 感染之间的关系进行系统评估。截至 2023 年 10 月 7 日,我们在各种数据库中进行了全面的文献检索。其中包括评估实验室确诊的 COVID-19 患者、血清中 25- 羟维生素 D 水平和临床结果的研究。采用纽卡斯尔-渥太华量表进行质量评估。共纳入了 13 项研究,这些研究在 6 个国家进行,涉及 1,071 名儿科患者。患有 COVID-19 的儿童和青少年普遍缺乏维生素 D。一些研究表明,维生素 D 缺乏会显著增加 COVID-19 感染的风险,并与疾病进展有关。此外,维生素 D 缺乏还与炎症标志物水平升高、淋巴细胞计数减少以及发热和咳嗽等临床症状加重有关。保持足够的维生素 D 水平可能是降低儿童和青少年 COVID-19 严重程度和相关并发症的关键策略。然而,在 COVID-19 大流行的背景下,还需要开展更多高质量的研究,以制定针对这一人群的维生素 D 补充剂的具体指南。
{"title":"Association Between the Level of Vitamin D and COVID-19 Infection in Children and Adolescents: A Systematic Review.","authors":"Zohreh-Al-Sadat Ghoreshi, Javad Charostad, Nasir Arefinia, Mohsen Nakhaie, Mohammad Rezaei Zadeh Rukerd, Aryan Zandi, Seyed Danial Alizadeh, Seyedeh Mahdieh Khoshnazar, Faranak Salajegheh","doi":"10.4269/ajtmh.24-0206","DOIUrl":"10.4269/ajtmh.24-0206","url":null,"abstract":"<p><p>The COVID-19 pandemic has exerted a notable impact on worldwide health across diverse age groups. Although children and adolescents were initially considered less vulnerable, they have also shown susceptibility to the virus, emphasizing the importance of understanding associated risk factors. Epidemiological data reveal an increasing number of COVID-19 cases in this age group. The aim is to conduct a systematic assessment of the association between the level of vitamin D and COVID-19 infection in children and adolescents following Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) guidelines. A comprehensive literature search was performed across various databases up to October 7, 2023. Studies assessing laboratory-confirmed COVID-19 patients, the level of 25-hydroxyvitamin D in serum, and clinical outcomes were encompassed. Quality assessment was performed using the Newcastle-Ottawa Scale. Thirteen studies, conducted across six countries and involving 1,071 pediatric patients, were included. Vitamin D deficiency was prevalent among children and adolescents with COVID-19. Some studies suggested that vitamin D deficiency significantly increased the risk of COVID-19 infection and was linked to disease progression. Furthermore, deficiency in vitamin D demonstrated an association with increased levels of inflammatory markers, reduced lymphocyte counts, and heightened clinical symptoms, including fever and cough. Maintaining adequate vitamin D levels may be a crucial strategy for reducing COVID-19 severity and associated complications in children and adolescents. Nevertheless, there is a requirement for additional high-quality research to establish specific guidelines regarding vitamin D supplementation in this population amid the ongoing COVID-19 pandemic.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142124521","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Andrea C Carcelen, Alex C Kong, Saki Takahashi, Sonia Hegde, Thomas Jaenisch, May Chu, Rosemary Rochford, Natalya Kostandova, Emily S Gurley, Amy Wesolowski, Andrew S Azman, Fiona R M van der Klis, Gerco den Hartog, Christopher Drakeley, Christopher D Heaney, Amy K Winter, Henrik Salje, Isabel Rodriguez-Barraquer, Daniel T Leung, Sammy M Njenga, Eunice Wangeci Kagucia, Kondwani C Jambo, Nicole Wolter, Richelle C Charles, Martha-Idalí Saboyá-Díaz, Diana L Martin, William J Moss
Multiplex-based serological surveillance is a valuable but underutilized tool to understand gaps in population-level exposure, susceptibility, and immunity to infectious diseases. Assays for which blood samples can be tested for antibodies against several pathogens simultaneously, such as multiplex bead immunoassays, can more efficiently integrate public health surveillance in low- and middle-income countries. On March 7-8, 2023 a group of experts representing research institutions, multilateral organizations, private industry, and country partners met to discuss experiences, identify challenges and solutions, and create a community of practice for integrated, multi-pathogen serosurveillance using multiplex bead assay technologies. Participants were divided into six working groups: 1) supply chain; 2) laboratory assays; 3) seroepidemiology; 4) data analytics; 5) sustainable implementation; and 6) use case scenarios. These working groups discussed experiences, challenges, solutions, and research needs to facilitate integrated, multi-pathogen serosurveillance for public health. Several solutions were proposed to address challenges that cut across working groups.
{"title":"Challenges and Approaches to Establishing Multi-Pathogen Serosurveillance: Findings from the 2023 Serosurveillance Summit.","authors":"Andrea C Carcelen, Alex C Kong, Saki Takahashi, Sonia Hegde, Thomas Jaenisch, May Chu, Rosemary Rochford, Natalya Kostandova, Emily S Gurley, Amy Wesolowski, Andrew S Azman, Fiona R M van der Klis, Gerco den Hartog, Christopher Drakeley, Christopher D Heaney, Amy K Winter, Henrik Salje, Isabel Rodriguez-Barraquer, Daniel T Leung, Sammy M Njenga, Eunice Wangeci Kagucia, Kondwani C Jambo, Nicole Wolter, Richelle C Charles, Martha-Idalí Saboyá-Díaz, Diana L Martin, William J Moss","doi":"10.4269/ajtmh.24-0296","DOIUrl":"10.4269/ajtmh.24-0296","url":null,"abstract":"<p><p>Multiplex-based serological surveillance is a valuable but underutilized tool to understand gaps in population-level exposure, susceptibility, and immunity to infectious diseases. Assays for which blood samples can be tested for antibodies against several pathogens simultaneously, such as multiplex bead immunoassays, can more efficiently integrate public health surveillance in low- and middle-income countries. On March 7-8, 2023 a group of experts representing research institutions, multilateral organizations, private industry, and country partners met to discuss experiences, identify challenges and solutions, and create a community of practice for integrated, multi-pathogen serosurveillance using multiplex bead assay technologies. Participants were divided into six working groups: 1) supply chain; 2) laboratory assays; 3) seroepidemiology; 4) data analytics; 5) sustainable implementation; and 6) use case scenarios. These working groups discussed experiences, challenges, solutions, and research needs to facilitate integrated, multi-pathogen serosurveillance for public health. Several solutions were proposed to address challenges that cut across working groups.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142124522","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Antibiotic use in animals has been identified as a major contributing factor for antibiotic resistance. Given the limited access to veterinary services, the choice of antibiotic and the dosage are determined by the farmers. By analyzing prescription practices and their appropriateness, we can compare performance in antibiotic stewardship across regions to drive change toward national goals and to guide policy interventions. This study used an integrated approach to assess antibiotic use at the grassroots in a rural poultry-keeping community in Wakiso District, Uganda. Medical prescriptions of 347 outpatients were captured between September 2021 and November 2021 via systematic random sampling of patients attending a local health center and were reviewed to decode antibiotic use characteristics and patterns. In the same period, structured questionnaires were issued to 36 poultry farmers in the same area to obtain information on their antibiotic use practices. Of the 347 human outpatient prescriptions reviewed, 250 (72%) recommended at least one antibiotic at a mean of 1.7 antibiotics per prescription. Conversely, all the poultry farms reported antibiotic use. There was significantly more use of macrolides and tetracyclines on poultry farms than at the local health centers and more use of penicillins, nitroimidazoles, and cephalosporins in humans than in poultry. There is unregulated use of critically important antibiotics in poultry and a misuse of antibiotics in the health center due to the lack of adequate diagnostic services. There is a need to improve point-of-care diagnostics of both human and poultry diseases in this community to guide antibiotic use.
{"title":"Antibiotic Use Characteristics and Patterns in Humans and Poultry in Wakiso District, Uganda.","authors":"David Wagaba, Peter Waiswa, John Bosco Kalule","doi":"10.4269/ajtmh.24-0227","DOIUrl":"10.4269/ajtmh.24-0227","url":null,"abstract":"<p><p>Antibiotic use in animals has been identified as a major contributing factor for antibiotic resistance. Given the limited access to veterinary services, the choice of antibiotic and the dosage are determined by the farmers. By analyzing prescription practices and their appropriateness, we can compare performance in antibiotic stewardship across regions to drive change toward national goals and to guide policy interventions. This study used an integrated approach to assess antibiotic use at the grassroots in a rural poultry-keeping community in Wakiso District, Uganda. Medical prescriptions of 347 outpatients were captured between September 2021 and November 2021 via systematic random sampling of patients attending a local health center and were reviewed to decode antibiotic use characteristics and patterns. In the same period, structured questionnaires were issued to 36 poultry farmers in the same area to obtain information on their antibiotic use practices. Of the 347 human outpatient prescriptions reviewed, 250 (72%) recommended at least one antibiotic at a mean of 1.7 antibiotics per prescription. Conversely, all the poultry farms reported antibiotic use. There was significantly more use of macrolides and tetracyclines on poultry farms than at the local health centers and more use of penicillins, nitroimidazoles, and cephalosporins in humans than in poultry. There is unregulated use of critically important antibiotics in poultry and a misuse of antibiotics in the health center due to the lack of adequate diagnostic services. There is a need to improve point-of-care diagnostics of both human and poultry diseases in this community to guide antibiotic use.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142124588","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
S Benedict Dossen, J Mike Mulbah, April Hargreaves, Samhita Kumar, David Mothersill, Gerard Loughnane, Eve Byrd, Angie Tarr Nyakoon, Joseph S Quoi, Ikenna D Ebuenyi
Mental health stigma remains a major global problem associated with low self-esteem, social withdrawal, and poor health-seeking behavior in individuals. However, limited published evidence details these challenges in Liberia. Knowledge of public perceptions toward mental illness and key trends in the associations between knowledge of mental, neurological, and substance use disorders (MNSs) and stigma is crucial to designing evidence-based mental health policies and supporting service delivery. This population-representative survey explored and quantified stigma related to MNSs in four health regions in Liberia, using a multistage stratified random sampling of 1,148 residents. Four internationally validated scales were used to assess knowledge, attitudes, and perceptions toward schizophrenia, bipolar disorder, epilepsy, and substance use disorder including the 1) Mental Health Attribution Questionnaire; 2) Five Question Stigma Indicator Questionnaire to assess Community Stigma; 3) Reported Intended Behavioral Scale; and 4) Personal Acceptance Level of Conditions. Data from interviews with 1,140 participants (96% response rate) were analyzed using central tendencies, hypothesis testing with simple logistic regression, and bivariate analysis for association between dependent and independent variables. Low mental health knowledge was found to be a strong predictor of discriminatory behaviors and stigma. Results revealed that exposure to movies or television significantly predicted increased discriminatory tendencies and that a lesser degree of acceptance was shown toward substance use disorder than any of the other conditions. These findings underscore the need for increased awareness and education about mental health to eliminate stigma and promote better care and inclusion for people living with MNSs.
{"title":"Assessing Stigma Toward Mental, Neurological, and Substance Use Disorders in Liberia: A Population Representative Study.","authors":"S Benedict Dossen, J Mike Mulbah, April Hargreaves, Samhita Kumar, David Mothersill, Gerard Loughnane, Eve Byrd, Angie Tarr Nyakoon, Joseph S Quoi, Ikenna D Ebuenyi","doi":"10.4269/ajtmh.24-0203","DOIUrl":"10.4269/ajtmh.24-0203","url":null,"abstract":"<p><p>Mental health stigma remains a major global problem associated with low self-esteem, social withdrawal, and poor health-seeking behavior in individuals. However, limited published evidence details these challenges in Liberia. Knowledge of public perceptions toward mental illness and key trends in the associations between knowledge of mental, neurological, and substance use disorders (MNSs) and stigma is crucial to designing evidence-based mental health policies and supporting service delivery. This population-representative survey explored and quantified stigma related to MNSs in four health regions in Liberia, using a multistage stratified random sampling of 1,148 residents. Four internationally validated scales were used to assess knowledge, attitudes, and perceptions toward schizophrenia, bipolar disorder, epilepsy, and substance use disorder including the 1) Mental Health Attribution Questionnaire; 2) Five Question Stigma Indicator Questionnaire to assess Community Stigma; 3) Reported Intended Behavioral Scale; and 4) Personal Acceptance Level of Conditions. Data from interviews with 1,140 participants (96% response rate) were analyzed using central tendencies, hypothesis testing with simple logistic regression, and bivariate analysis for association between dependent and independent variables. Low mental health knowledge was found to be a strong predictor of discriminatory behaviors and stigma. Results revealed that exposure to movies or television significantly predicted increased discriminatory tendencies and that a lesser degree of acceptance was shown toward substance use disorder than any of the other conditions. These findings underscore the need for increased awareness and education about mental health to eliminate stigma and promote better care and inclusion for people living with MNSs.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11376113/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142139044","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tuberculous meningitis (TBM) is a common infectious disease of the central nervous system. Detection of cerebrospinal fluid (CSF) adenosine deaminase (ADA) activity for the diagnosis of TBM has a relatively high accuracy. Most previous reports determined ADA levels by following the colorimetric method of Giusti (endpoint assay). Recently, a Diazyme ADA assay kit was developed to determine CSF ADA levels. This study aimed to define the cutoff value of CSF ADA that is diagnostic for TBM with the Diazyme ADA assay kit. Adults with meningitis were included in the study. The diagnostic properties of CSF ADA for TBM as determined by the Diazyme ADA assay kit were assessed by the receiver operating characteristic curve, area under the curve, sensitivity, specificity, and likelihood ratios. There were 97 patients enrolled in the study, comprising 15 cases of TBM and 82 cases of non-TBM meningitis. The median CSF ADA activity level in the TBM group was significantly higher than in the non-TBM group (P = 0.002), with a mean difference of 14.5 U/L (95% CI: 5.3-23.8 U/L). A CSF ADA level of 6.1 U/L was the best cutoff value to differentiate between the TBM and non-TBM groups, with a sensitivity of 53.33%, a specificity of 89.02%, a positive likelihood ratio of 4.86, a negative likelihood ratio of 0.52, and an area under the curve of 0.75. A CSF ADA level of 6.1 U/L determined by the Diazyme ADA assay kit could be used as a diagnostic tool in the early diagnosis of TBM.
结核性脑膜炎(TBM)是一种常见的中枢神经系统感染性疾病。检测脑脊液(CSF)腺苷脱氨酶(ADA)活性以诊断结核性脑膜炎的准确性相对较高。之前的大多数报告都是采用 Giusti 的比色法(终点检测法)来测定 ADA 水平。最近,人们开发了一种 Diazyme ADA 检测试剂盒来测定 CSF ADA 水平。本研究旨在通过 Diazyme ADA 检测试剂盒确定可诊断 TBM 的 CSF ADA 临界值。研究对象包括患有脑膜炎的成人。通过接收者操作特征曲线、曲线下面积、灵敏度、特异性和似然比评估了 Diazyme ADA 检测试剂盒测定的 CSF ADA 对 TBM 的诊断特性。共有 97 名患者参与了这项研究,其中包括 15 例 TBM 和 82 例非 TBM 脑膜炎患者。TBM 组的 CSF ADA 活性水平中位数明显高于非 TBM 组(P = 0.002),平均差异为 14.5 U/L(95% CI:5.3-23.8 U/L)。CSF ADA 水平为 6.1 U/L 是区分 TBM 组和非 TBM 组的最佳临界值,灵敏度为 53.33%,特异度为 89.02%,阳性似然比为 4.86,阴性似然比为 0.52,曲线下面积为 0.75。Diazyme ADA 检测试剂盒测定的 CSF ADA 水平为 6.1 U/L,可作为早期诊断 TBM 的诊断工具。
{"title":"Kinetic Determination of Cerebrospinal Fluid Adenosine Deaminase Activity for the Diagnosis of Tuberculous Meningitis.","authors":"Verajit Chotmongkol, Phaosin Thongsaen, Kittisak Sawanyawisuth, Sittichai Khamsai, Narongrit Kasemsap, Nisa Vorasoot, Kannikar Kongbunkiat, Somsak Tiamkao, Chanpen Sriphan, Lumyai Wonglakorn","doi":"10.4269/ajtmh.23-0555","DOIUrl":"10.4269/ajtmh.23-0555","url":null,"abstract":"<p><p>Tuberculous meningitis (TBM) is a common infectious disease of the central nervous system. Detection of cerebrospinal fluid (CSF) adenosine deaminase (ADA) activity for the diagnosis of TBM has a relatively high accuracy. Most previous reports determined ADA levels by following the colorimetric method of Giusti (endpoint assay). Recently, a Diazyme ADA assay kit was developed to determine CSF ADA levels. This study aimed to define the cutoff value of CSF ADA that is diagnostic for TBM with the Diazyme ADA assay kit. Adults with meningitis were included in the study. The diagnostic properties of CSF ADA for TBM as determined by the Diazyme ADA assay kit were assessed by the receiver operating characteristic curve, area under the curve, sensitivity, specificity, and likelihood ratios. There were 97 patients enrolled in the study, comprising 15 cases of TBM and 82 cases of non-TBM meningitis. The median CSF ADA activity level in the TBM group was significantly higher than in the non-TBM group (P = 0.002), with a mean difference of 14.5 U/L (95% CI: 5.3-23.8 U/L). A CSF ADA level of 6.1 U/L was the best cutoff value to differentiate between the TBM and non-TBM groups, with a sensitivity of 53.33%, a specificity of 89.02%, a positive likelihood ratio of 4.86, a negative likelihood ratio of 0.52, and an area under the curve of 0.75. A CSF ADA level of 6.1 U/L determined by the Diazyme ADA assay kit could be used as a diagnostic tool in the early diagnosis of TBM.</p>","PeriodicalId":7752,"journal":{"name":"American Journal of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142124525","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}