Origins of Ultrasensitivity and Complex Signaling Dynamics of Cellular Hydrogen Peroxide and Peroxiredoxin.

IF 6 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Antioxidants Pub Date : 2025-02-18 DOI:10.3390/antiox14020235
Shengnan Liu, Jingbo Pi, Qiang Zhang
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Abstract

Hydrogen peroxide (H2O2) plays a crucial role in cell signaling in response to physiological and environmental perturbations. H2O2 can oxidize typical 2-Cys peroxiredoxin (PRX) first into a sulfenic acid, which resolves into a disulfide that can be reduced by thioredoxin (TRX)/TRX reductase (TR). At high levels, H2O2 can also hyperoxidize sulfenylated PRX into a sulfinic acid that can be reduced by sulfiredoxin (SRX). Therefore, PRX, TRX, TR, and SRX (abbreviated as PTRS system here) constitute the coupled sulfenylation and sulfinylation cycle (CSSC), where certain oxidized PRX and TRX forms also function as redox signaling intermediates. Earlier studies have revealed that the PTRS system is capable of rich signaling dynamics, including linearity, ultrasensitivity/switch-like response, nonmonotonicity, circadian oscillation, and possibly, bistability. However, the origins of ultrasensitivity, which is fundamentally required for redox signal amplification, have not been adequately characterized, and their roles in enabling complex nonlinear dynamics of the PTRS system remain to be determined. Through in-depth mathematical modeling analyses, here we revealed multiple sources of ultrasensitivity that are intrinsic to the CSSC, including zero-order kinetic cycles, multistep H2O2 signaling, and a mechanism arising from diminished H2O2 removal at high PRX hyperoxidation state. The CSSC, structurally a positive feedback loop, is capable of bistability under certain parameter conditions, which requires embedding multiple sources of ultrasensitivity identified. Forming a negative feedback loop with cytosolic SRX as previously observed in energetically active cells, the mitochondrial PTRS system (where PRX3 is expressed) can produce sustained circadian oscillations through supercritical Hopf bifurcations. In conclusion, our study provided novel quantitative insights into the dynamical complexity of the PTRS system and improved appreciation of intracellular redox signaling.

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细胞过氧化氢和过氧化还原酶的超灵敏性和复杂信号动态的起源
过氧化氢(H2O2)在应对生理和环境干扰的细胞信号传导过程中发挥着至关重要的作用。H2O2 可将典型的 2-Cys 过氧化还原酶(PRX)首先氧化成亚硫酸,然后再分解成二硫化物,硫氧化还原酶(TRX)/TRX 还原酶(TR)可将其还原。在高浓度下,H2O2 还能将亚磺酰化的 PRX 过度氧化成亚硫酸,而亚硫酸又能被亚磺酸还原酶(SRX)还原。因此,PRX、TRX、TR 和 SRX(此处缩写为 PTRS 系统)构成了耦合亚磺酰化和亚磺酰化循环(CSSC),其中某些氧化的 PRX 和 TRX 形式还可作为氧化还原信号中间体发挥作用。早期的研究表明,PTRS 系统具有丰富的信号动态特性,包括线性、超灵敏性/开关样反应、非单调性、昼夜振荡以及可能的双稳态性。然而,超灵敏性是氧化还原信号放大的基本要求,其起源尚未得到充分表征,它们在实现 PTRS 系统复杂的非线性动态中的作用也有待确定。通过深入的数学建模分析,我们在此揭示了 CSSC 固有的超灵敏性的多个来源,包括零阶动力学循环、多步骤 H2O2 信号传递,以及在高 PRX 高氧化状态下 H2O2 清除减弱所产生的机制。从结构上看,CSSC 是一个正反馈回路,但在某些参数条件下却具有双稳态性,这就需要嵌入已确定的多个超敏感性来源。正如之前在能量活跃的细胞中观察到的那样,线粒体 PTRS 系统(PRX3 在其中表达)与细胞质 SRX 形成负反馈环路,可通过超临界霍普夫分岔产生持续的昼夜振荡。总之,我们的研究为 PTRS 系统的动态复杂性提供了新的定量见解,并提高了对细胞内氧化还原信号的认识。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Antioxidants
Antioxidants Biochemistry, Genetics and Molecular Biology-Physiology
CiteScore
10.60
自引率
11.40%
发文量
2123
审稿时长
16.3 days
期刊介绍: Antioxidants (ISSN 2076-3921), provides an advanced forum for studies related to the science and technology of antioxidants. It publishes research papers, reviews and communications. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. Electronic files and software regarding the full details of the calculation or experimental procedure, if unable to be published in a normal way, can be deposited as supplementary electronic material.
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