New thienopyrimidine-based derivatives: Design, synthesis, and biological evaluation as potent anticancer agents and VEGFR-2 inhibitors

IF 4.7 2区 化学 Q2 CHEMISTRY, PHYSICAL Journal of Molecular Structure Pub Date : 2025-07-05 Epub Date: 2025-02-26 DOI:10.1016/j.molstruc.2025.141884
Myrna A. Farag, Manal M. Kandeel, Asmaa E. Kassab, Samar I. Faggal
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Abstract

A series of new thienopyrimidine (TP)-based derivatives were designed and synthesized in accordance with the structure-activity relationship (SAR) studies of VEGFR-2 inhibitors. The synthesized TP derivatives were inspected for their anti-proliferative activity on a panel of 60 different human cancer cell lines (NCI, USA). This preliminary in vitro anticancer screening revealed that three scaffolds 5a, 5g, and 5h were the most promising growth inhibitors at a dose of 10 µM therefore, they were further assessed at five dose concentrations. The GI50, TGI, and LC50 results were promising for the three scaffolds against the leukemia HL‐60 (TB) cell line. Therefore, their cytotoxic activity was examined against a normal blood cell line (Lymphocytes PCS-800-017), where compounds 5a, 5g, and 5h exhibited IC50 values of 0.221, 0.386, and 0.269 µM, respectively against VEGFR-2 enzyme. They exerted their cytotoxic effect by proliferation inhibition of leukemia HL-60 (TB) cells in the G0-G1 phase. Furthermore, they significantly increased the total apoptotic ratio by 16.59, 11.01, and 13.05 folds, respectively. An increase in caspase-3 levels accompanied this apoptotic activity, where compound 5a demonstrated apoptotic caspase-3 levels of 4.99 folds, which was higher than that of Sorafenib (4.43 folds); while compounds 5g and 5h showed caspase-3 levels that were comparable to that of Sorafenib. Additionally, anti-angiogenic activity against human umbilical vascular endothelial cells (HUVECs) was performed using the wound healing migration assay. The wound closure percentage and migratory potential of HUVEC cells were significantly reduced after exposure to TPs 5a, 5g, and 5h for 72 h. These results were further explained by molecular docking studies using the crystal structure of VEGFR-2 receptor (PDB ID: 4ASD) which revealed the ability of TP derivatives to form a network of key interactions, known to be essential for VEGFR-2 inhibitors.

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新的噻吩嘧啶衍生物:设计、合成和作为有效抗癌剂和VEGFR-2抑制剂的生物学评价
根据对VEGFR-2抑制剂构效关系(SAR)的研究,设计并合成了一系列新的噻吩嘧啶类衍生物。合成的TP衍生物在60种不同的人类癌细胞系(NCI, USA)上检测了其抗增殖活性。初步的体外抗癌筛选显示,在10µM剂量下,5a、5g和5h三种支架是最有希望的生长抑制剂,因此,我们进一步对它们进行了5种剂量浓度的评估。三种支架对白血病HL - 60 (TB)细胞系的GI50、TGI和LC50结果都很有希望。因此,对正常血细胞系(淋巴细胞PCS-800-017)检测了它们的细胞毒活性,其中化合物5a, 5g和5h对VEGFR-2酶的IC50值分别为0.221,0.386和0.269µM。它们通过抑制白血病HL-60 (TB)细胞在G0-G1期的增殖来发挥细胞毒作用。总凋亡率分别提高了16.59倍、11.01倍和13.05倍。caspase-3水平的增加伴随着这种凋亡活性,其中化合物5a显示凋亡caspase-3水平为4.99倍,高于索拉非尼(4.43倍);而化合物5g和5h显示caspase-3水平与索拉非尼相当。此外,通过伤口愈合迁移实验,研究了对人脐血管内皮细胞(HUVECs)的抗血管生成活性。暴露于TP 5a、5g和5h 72小时后,HUVEC细胞的伤口愈合率和迁移潜力显著降低。利用VEGFR-2受体晶体结构(PDB ID: 4ASD)的分子对接研究进一步解释了这些结果,该研究揭示了TP衍生物形成关键相互作用网络的能力,已知这是VEGFR-2抑制剂所必需的。
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来源期刊
Journal of Molecular Structure
Journal of Molecular Structure 化学-物理化学
CiteScore
7.10
自引率
15.80%
发文量
2384
审稿时长
45 days
期刊介绍: The Journal of Molecular Structure is dedicated to the publication of full-length articles and review papers, providing important new structural information on all types of chemical species including: • Stable and unstable molecules in all types of environments (vapour, molecular beam, liquid, solution, liquid crystal, solid state, matrix-isolated, surface-absorbed etc.) • Chemical intermediates • Molecules in excited states • Biological molecules • Polymers. The methods used may include any combination of spectroscopic and non-spectroscopic techniques, for example: • Infrared spectroscopy (mid, far, near) • Raman spectroscopy and non-linear Raman methods (CARS, etc.) • Electronic absorption spectroscopy • Optical rotatory dispersion and circular dichroism • Fluorescence and phosphorescence techniques • Electron spectroscopies (PES, XPS), EXAFS, etc. • Microwave spectroscopy • Electron diffraction • NMR and ESR spectroscopies • Mössbauer spectroscopy • X-ray crystallography • Charge Density Analyses • Computational Studies (supplementing experimental methods) We encourage publications combining theoretical and experimental approaches. The structural insights gained by the studies should be correlated with the properties, activity and/ or reactivity of the molecule under investigation and the relevance of this molecule and its implications should be discussed.
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