MediViSTA: Medical Video Segmentation Via Temporal Fusion SAM Adaptation for Echocardiography.

IF 6.8 2区 医学 Q1 COMPUTER SCIENCE, INFORMATION SYSTEMS IEEE Journal of Biomedical and Health Informatics Pub Date : 2025-12-01 DOI:10.1109/JBHI.2025.3540306
Sekeun Kim, Pengfei Jin, Cheng Chen, Kyungsang Kim, Zhiliang Lyu, Hui Ren, Sunghwan Kim, Zhengliang Liu, Aoxiao Zhong, Tianming Liu, Xiang Li, Quanzheng Li
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Abstract

Despite achieving impressive results in general-purpose semantic segmentation with strong generalization on natural images, the Segment Anything Model (SAM) has shown less precision and stability in medical image segmentation. In particular, the original SAM architecture is designed for 2D natural images and is therefore not support to handle three-dimensional information, which is particularly important for medical imaging modalities that are often volumetric or video data. In this paper, we introduce MediViSTA, a parameter-efficient fine-tuning method designed to adapt the vision foundation model for medical video, with a specific focus on echocardiography segmentation. To achieve spatial adaptation, we propose a frequency feature fusion technique that injects spatial frequency information from a CNN branch. For temporal adaptation, we integrate temporal adapters within the transformer blocks of the image encoder. Using a fine-tuning strategy, only a small subset of pre-trained parameters is updated, allowing efficient adaptation to echocardiography data. The effectiveness of our method has been comprehensively evaluated on three datasets, comprising two public datasets and one multi-center in-house dataset. Our method consistently outperforms various state-of-the-art approaches without using any prompts. Furthermore, our model exhibits strong generalization capabilities on unseen datasets, surpassing the second-best approach by 2.15% in Dice and 0.09 in temporal consistency. The results demonstrate the potential of MediViSTA to significantly advance echocardiography video segmentation, offering improved accuracy and robustness in cardiac assessment applications.

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MediViSTA:基于时间融合SAM的超声心动图医学视频分割。
尽管在自然图像的通用语义分割中取得了令人印象深刻的结果,但在医学图像分割中SAM (Segment Anything Model)的精度和稳定性较差。特别是,SAM架构是为二维自然图像设计的,因此不支持处理三维信息,这对于通常是体积或视频数据的医学成像模式尤其重要。在本文中,我们介绍了MediViSTA,一种参数高效的微调方法,旨在适应医学视频的视觉基础模型,并特别关注超声心动图分割。为了实现空间自适应,我们提出了一种频率特征融合技术,该技术注入来自CNN分支的空间频率信息。为了时间适应,我们在图像编码器的转换块中集成了时间适配器。使用微调策略,只有一小部分预先训练的参数被更新,允许有效地适应超声心动图数据。我们的方法的有效性已经在三个数据集上进行了综合评估,包括两个公共数据集和一个多中心内部数据集。我们的方法在不使用任何提示的情况下始终优于各种最先进的方法。此外,我们的模型在未见过的数据集上表现出强大的泛化能力,在Dice上比第二好的方法高出2.15%,在时间一致性上比第二好的方法高出0.09。研究结果表明,MediViSTA有潜力显著推进超声心动图视频分割,提高心脏评估应用的准确性和稳健性。
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来源期刊
IEEE Journal of Biomedical and Health Informatics
IEEE Journal of Biomedical and Health Informatics COMPUTER SCIENCE, INFORMATION SYSTEMS-COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
CiteScore
13.60
自引率
6.50%
发文量
1151
期刊介绍: IEEE Journal of Biomedical and Health Informatics publishes original papers presenting recent advances where information and communication technologies intersect with health, healthcare, life sciences, and biomedicine. Topics include acquisition, transmission, storage, retrieval, management, and analysis of biomedical and health information. The journal covers applications of information technologies in healthcare, patient monitoring, preventive care, early disease diagnosis, therapy discovery, and personalized treatment protocols. It explores electronic medical and health records, clinical information systems, decision support systems, medical and biological imaging informatics, wearable systems, body area/sensor networks, and more. Integration-related topics like interoperability, evidence-based medicine, and secure patient data are also addressed.
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