Discovery of new thiazolidin-4-one and thiazole nucleus incorporation sulfaguanidine scaffold as new class of antimicrobial agents: Design, synthesis, in silico ADMET, and docking simulation

IF 4.7 2区 化学 Q2 CHEMISTRY, PHYSICAL Journal of Molecular Structure Pub Date : 2025-02-27 DOI:10.1016/j.molstruc.2025.141879
Ola A. Abu Ali , Ahmed Ragab , Yousry A. Ammar , Moustafa S. Abusaif
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Abstract

In this study, a series of novel cyanoacetamide derivatives based on a sulfaguanidine scaffold incorporating thiazolidine-4-one (compounds 5–8) and thiazole moieties (compounds 9–12) were synthesized, and their structures were confirmed using different spectroscopic techniques. The designed derivatives were screened against four bacterial strains (including two clinical isolates) and one fungal strain. The newly designed thiazolidin-4-one derivatives (5–8) and thiazole derivatives (9–12) demonstrated broad-spectrum activity against the tested strains, showing good to promising activity against bacterial strains and moderate activity against C. albicans, compared to the positive controls. The MIC and MBC/MFC values of thiazole derivatives (9–12) displayed high potency with lower MIC values against the tested strains in comparison to the thiazolidine-4-one derivatives (5–8). Among the designed derivatives, compounds 9 and 11 revealed significant antibacterial activity with MIC values ranging between (15.6–31.3 µg/mL) and MBCs (62.5–125 µg/mL), compared to Penicillin G (MIC = 31.3 µg/mL and MBC = 62.5 µg/mL) against gram-positive strains. On the other hand, these derivatives 9 and 11 exhibited MIC values (3.91–62.5 µg/mL) and MBC (31.3–250 µg/mL) against gram-negative strains compared to Ciprofloxacin (MIC = 15.6 and MBC = 15.6–31.3 µg/mL). In addition, compounds 9 and 11 exhibited moderate activity with MIC values (31.3–62.5 µg/mL) and MFC (125–250 µg/mL) in comparison to Amphotericin B (MIC = 31.3 and MFC = 62.5 µg/mL). Additionally, compounds 9 and 11 revealed bactericidal and fungicidal activities, except compound 9 which showed bacteriostatic activity against E. coli according to NCCLS. Furthermore, thiazoles 9 and 11 demonstrated good oral bioavailability and physicochemical properties and obeyed Lipinski's rule with a good toxicity profile. Molecular docking simulations suggested that dihydrofolate reductase (DHFR) may serve as a potential target for the mode of action through various interactions.

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新型噻唑烷-4- 1和噻唑核结合磺胺嘧啶支架的发现:设计、合成、硅ADMET和对接模拟
本研究以噻唑烷-4- 1(化合物5-8)和噻唑基(化合物9-12)为骨架,合成了一系列新型氰乙酰胺衍生物,并利用不同的光谱技术对其结构进行了确证。设计的衍生物对4株细菌(包括2株临床分离株)和1株真菌进行了筛选。新设计的噻唑烷-4- 1衍生物(5-8)和噻唑衍生物(9-12)对被试菌株具有广谱活性,与阳性对照相比,对细菌菌株具有良好至有希望的活性,对白色念珠菌具有中等活性。与噻唑烷-4- 1衍生物(5-8)相比,噻唑衍生物(9-12)的MIC值和MBC/MFC值较高,MIC值较低。与青霉素g (MIC = 31.3µg/mL和MBC = 62.5µg/mL)相比,化合物9和11对革兰氏阳性菌的抑菌活性显著,MIC值在15.6 ~ 31.3µg/mL和MBCs(62.5 ~ 125µg/mL)。另一方面,与环丙沙星(MIC = 15.6, MBC = 15.6 - 31.3µg/mL)相比,衍生物9和11对革兰氏阴性菌的MIC值为3.91 ~ 62.5µg/mL, MBC值为31.3 ~ 250µg/mL。与Amphotericin B (MIC = 31.3, MFC = 62.5µg/mL)相比,化合物9和11的MIC值为31.3 ~ 62.5µg/mL, MFC值为125 ~ 250µg/mL,具有中等活性。除化合物9对大肠杆菌有抑菌活性外,化合物9和化合物11均有杀菌和杀真菌活性。此外,噻唑9和11表现出良好的口服生物利用度和理化性质,符合Lipinski规则,毒性谱良好。分子对接模拟表明,二氢叶酸还原酶(DHFR)可能通过各种相互作用作为作用模式的潜在靶点。
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来源期刊
Journal of Molecular Structure
Journal of Molecular Structure 化学-物理化学
CiteScore
7.10
自引率
15.80%
发文量
2384
审稿时长
45 days
期刊介绍: The Journal of Molecular Structure is dedicated to the publication of full-length articles and review papers, providing important new structural information on all types of chemical species including: • Stable and unstable molecules in all types of environments (vapour, molecular beam, liquid, solution, liquid crystal, solid state, matrix-isolated, surface-absorbed etc.) • Chemical intermediates • Molecules in excited states • Biological molecules • Polymers. The methods used may include any combination of spectroscopic and non-spectroscopic techniques, for example: • Infrared spectroscopy (mid, far, near) • Raman spectroscopy and non-linear Raman methods (CARS, etc.) • Electronic absorption spectroscopy • Optical rotatory dispersion and circular dichroism • Fluorescence and phosphorescence techniques • Electron spectroscopies (PES, XPS), EXAFS, etc. • Microwave spectroscopy • Electron diffraction • NMR and ESR spectroscopies • Mössbauer spectroscopy • X-ray crystallography • Charge Density Analyses • Computational Studies (supplementing experimental methods) We encourage publications combining theoretical and experimental approaches. The structural insights gained by the studies should be correlated with the properties, activity and/ or reactivity of the molecule under investigation and the relevance of this molecule and its implications should be discussed.
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