Two-dimensional system dynamics of cytosolic and mitochondrial calcium in a obese hepatocyte cell

IF 2.9 3区 物理与天体物理 Q2 PHYSICS, MULTIDISCIPLINARY The European Physical Journal Plus Pub Date : 2025-03-05 DOI:10.1140/epjp/s13360-025-06144-z
Vedika Mishra, Neeru Adlakha
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Abstract

Calcium (\(\hbox {Ca}^{2+}\)) store and mitochondria play very important role in cell signaling. Despite extensive inquiry into calcium dynamics across diverse cell types, including hepatocytes, comprehension of the interconnected dynamics of cytosolic and mitochondrial calcium in normal and obese cellular milieus remains rudimentary. Calcium influx can manifest as either a transient blip or a more sustained puff, contingent upon cellular conditions. A puff, which is formed when several \(\hbox {IP}_{3}\) receptors open simultaneously, is larger than a blip, which is a tiny signal produced by a single \(\hbox {IP}_{3}\) receptor (IP3R) opening. These occurrences demonstrate cell’s capacity to regulate \(\hbox {Ca}^{2+}\) signaling precisely and vary from opening of a single channel (blip) to coordinated opening of several channels in a cluster (puff). One-dimensional model proposed by earlier researchers is able to incorporate the effect of only point source like blip but are not capable of providing effects of line sources like puffs. Higher dimensional model development is required to gain a deeper understanding of the local effects of different mechanisms and feedbacks in hepatocyte cells. Thus, a two-dimensional model for hepatocytes under normal and obese conditions, integrating a reaction-diffusion equation to delineate coupled dynamics of cytosolic and mitochondrial calcium, encompassing blip and puff phenomena has been proposed in this paper. Additionally, the ramifications of \(\hbox {Ca}^{2+}\) signaling on ATP generation and degradation rates, alongside the open channel probability of chloride and potassium ions has been investigated. Numerical simulations are executed employing the linear finite element method, spatially and Crank-Nicolson method, temporally. Furthermore, a comparative assessment of \(\hbox {Ca}^{2+}\) signaling, ATP generation, degradation rates and open channel probability of chloride and potassium ions in normal versus obese hepatocytes has been done.

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肥胖肝细胞胞质和线粒体钙的二维系统动力学
钙(\(\hbox {Ca}^{2+}\))储存和线粒体在细胞信号传导中起着非常重要的作用。尽管对包括肝细胞在内的不同细胞类型的钙动力学进行了广泛的研究,但对正常和肥胖细胞环境中细胞质和线粒体钙的相互关联动力学的理解仍然很初级。钙的内流可以表现为短暂的昙花一现或更持久的膨胀,这取决于细胞状况。当几个\(\hbox {IP}_{3}\)受体同时打开时形成的“泡”比单个\(\hbox {IP}_{3}\)受体(IP3R)打开时产生的微小信号“光点”要大。这些事件证明了细胞精确调节\(\hbox {Ca}^{2+}\)信号的能力,并且从单个通道的打开(光点)到集群中多个通道的协调打开(泡发)都有所不同。早期研究人员提出的一维模型只能包含点源(如光点)的影响,而不能提供线源(如泡芙)的影响。为了更深入地了解肝细胞中不同机制和反馈的局部作用,需要更高维度的模型开发。因此,本文提出了一个正常和肥胖条件下肝细胞的二维模型,整合反应-扩散方程来描述胞质和线粒体钙的耦合动力学,包括斑点和膨化现象。此外,\(\hbox {Ca}^{2+}\)信号传导对ATP生成和降解率的影响,以及氯离子和钾离子的开放通道概率也进行了研究。在空间上采用线性有限元法,在时间上采用Crank-Nicolson法进行了数值模拟。此外,研究人员还对正常和肥胖肝细胞中\(\hbox {Ca}^{2+}\)信号、ATP生成、氯离子和钾离子的降解率和开放通道概率进行了比较评估。图形摘要
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来源期刊
The European Physical Journal Plus
The European Physical Journal Plus PHYSICS, MULTIDISCIPLINARY-
CiteScore
5.40
自引率
8.80%
发文量
1150
审稿时长
4-8 weeks
期刊介绍: The aims of this peer-reviewed online journal are to distribute and archive all relevant material required to document, assess, validate and reconstruct in detail the body of knowledge in the physical and related sciences. The scope of EPJ Plus encompasses a broad landscape of fields and disciplines in the physical and related sciences - such as covered by the topical EPJ journals and with the explicit addition of geophysics, astrophysics, general relativity and cosmology, mathematical and quantum physics, classical and fluid mechanics, accelerator and medical physics, as well as physics techniques applied to any other topics, including energy, environment and cultural heritage.
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