Development of disease diagnosis technology based on coattention cross-fusion of multiomics data

IF 6 2区 化学 Q1 CHEMISTRY, ANALYTICAL Analytica Chimica Acta Pub Date : 2025-03-07 DOI:10.1016/j.aca.2025.343919
Mingtao Wu , Chen Chen , Xuguang Zhou , Hao Liu , Yujia Ren , Jin Gu , Xiaoyi Lv , Cheng Chen
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Abstract

Background

Early diagnosis is vital for increasing the rates of curing diseases and patient survival in medicine. With the advancement of biotechnology, the types of bioomics data are increasing. The integration of multiomics data can provide more comprehensive biological information, thereby achieving more accurate diagnoses than single-omics data can. Nevertheless, current multiomics research is often limited to the intelligent diagnosis of a single disease or a few types of omics data and lacks a multiomics disease diagnosis model that can be widely applied to different diseases. Therefore, developing a model that can effectively utilize multiomics data and accurately diagnose diseases has become an important challenge in medical research.

Results

On the basis of vibrational spectroscopy and metabolomics data, this study proposes an innovative coattention cross-fusion model for disease diagnosis on the basis of interactions of multiomics data. The model not only integrates the information of different omics data but also simulates the interactions between these data to achieve accurate diagnosis of diseases. Through comprehensive experiments, our method achieved accuracies of 95.00 %, 94.95 %, and 97.22 % and area under the curve (AUC) values of 95.00 %, 96.77 %, and 99.31 % on the cervical lymph node metastasis of the thyroid, systemic lupus erythematosus, and cancer datasets, respectively, indicating excellent performance in the diagnosis of multiple diseases.

Significance

The proposed model outperforms existing multiomics models, enhancing medical diagnostic accuracy and offering new approaches for multiomics data use in disease diagnosis. The innovative coattention cross-fusion module enables more effective multiomics data processing and analysis, serving as a potent tool for early and precise disease diagnosis with substantial clinical and research implications.

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基于多组学数据共关注交叉融合的疾病诊断技术发展
背景超声诊断对提高医学治愈率和患者生存率至关重要。随着生物技术的发展,生物组学数据的种类越来越多。多组学数据的整合可以提供更全面的生物学信息,从而实现比单组学数据更准确的诊断。然而,目前的多组学研究往往局限于对单一疾病或少数类型组学数据的智能诊断,缺乏可广泛应用于不同疾病的多组学疾病诊断模型。因此,开发一种能够有效利用多组学数据并准确诊断疾病的模型已成为医学研究的重要挑战。结果在振动光谱和代谢组学数据的基础上,提出了一种基于多组学数据相互作用的疾病诊断共关注交叉融合模型。该模型不仅集成了不同组学数据的信息,还模拟了这些数据之间的相互作用,从而实现疾病的准确诊断。通过综合实验,我们的方法对甲状腺、系统性红斑狼疮和癌症的颈部淋巴结转移数据集的准确率分别为95.00%、94.95%和97.22%,曲线下面积(AUC)值分别为95.00%、96.77%和99.31%,在多种疾病的诊断中表现优异。该模型优于现有的多组学模型,提高了医学诊断的准确性,为多组学数据在疾病诊断中的应用提供了新的途径。创新的共关注交叉融合模块可实现更有效的多组学数据处理和分析,作为具有重大临床和研究意义的早期和精确疾病诊断的有力工具。
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来源期刊
Analytica Chimica Acta
Analytica Chimica Acta 化学-分析化学
CiteScore
10.40
自引率
6.50%
发文量
1081
审稿时长
38 days
期刊介绍: Analytica Chimica Acta has an open access mirror journal Analytica Chimica Acta: X, sharing the same aims and scope, editorial team, submission system and rigorous peer review. Analytica Chimica Acta provides a forum for the rapid publication of original research, and critical, comprehensive reviews dealing with all aspects of fundamental and applied modern analytical chemistry. The journal welcomes the submission of research papers which report studies concerning the development of new and significant analytical methodologies. In determining the suitability of submitted articles for publication, particular scrutiny will be placed on the degree of novelty and impact of the research and the extent to which it adds to the existing body of knowledge in analytical chemistry.
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