Detection of radiosensitive subpopulations ex-vivo with Raman microspectroscopy.

IF 3.5 3区 医学 Q2 ONCOLOGY Frontiers in Oncology Pub Date : 2025-02-27 eCollection Date: 2025-01-01 DOI:10.3389/fonc.2025.1470431
Aidan D Meade, Adrian Maguire, Jane Bryant, Daniel Cullen, Dinesh Medipally, Lisa White, John Armstrong, Mary Dunne, Emma Noone, Shirley Bradshaw, Marie Finn, Aoife M Shannon, Orla L Howe, Fiona M Lyng
{"title":"Detection of radiosensitive subpopulations <i>ex-vivo</i> with Raman microspectroscopy.","authors":"Aidan D Meade, Adrian Maguire, Jane Bryant, Daniel Cullen, Dinesh Medipally, Lisa White, John Armstrong, Mary Dunne, Emma Noone, Shirley Bradshaw, Marie Finn, Aoife M Shannon, Orla L Howe, Fiona M Lyng","doi":"10.3389/fonc.2025.1470431","DOIUrl":null,"url":null,"abstract":"<p><p>Although significant advances in understanding the molecular drivers of acquired and inherited radiosensitivity have occurred in recent decades, a single analytical method which can detect and classify radiosensitivity remains elusive. Raman microspectroscopy has demonstrated capabilities in the objective classification of various diseases, and more recently in the detection and modelling of radiobiological effect. In this study, Raman spectroscopy is presented as a potential tool for the detection of radiosensitivity subpopulations represented by four lymphoblastoid cell lines derived from individuals with ataxia telangiectasia (2 lines), non-Hodgkins lymphoma, and Turner's syndrome. These are classified with respect to a population with mixed radiosensitivity, represented by lymphocytes drawn from both healthy controls, and prostate cancer patients. Raman spectroscopic measurements were made <i>ex-vivo</i> after exposure to X-ray doses of 0 Gy, 50 mGy and 500 mGy, in parallel to radiation-induced G2 chromosomal radiosensitivity scores, for all samples. Support vector machine models developed on the basis of the spectral data were capable of discrimination of radiosensitive populations before and after irradiation, with superior discrimination when spectra were subjected to a non-linear dimensionality reduction (UMAP) as opposed to a linear (PCA) approach. Models developed on spectral data acquired on samples irradiated <i>in-vitro</i> with a dose of 0Gy were found to provide the highest level of performance in discriminating between classes, with performances of F1 = 0.92 ± 0.06 achieved on a held-out test set. Overall, this study suggests that Raman spectroscopy may have potential as a tool for the detection of intrinsic radiosensitivity using liquid biopsies.</p>","PeriodicalId":12482,"journal":{"name":"Frontiers in Oncology","volume":"15 ","pages":"1470431"},"PeriodicalIF":3.5000,"publicationDate":"2025-02-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11903398/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Oncology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.3389/fonc.2025.1470431","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"ONCOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Although significant advances in understanding the molecular drivers of acquired and inherited radiosensitivity have occurred in recent decades, a single analytical method which can detect and classify radiosensitivity remains elusive. Raman microspectroscopy has demonstrated capabilities in the objective classification of various diseases, and more recently in the detection and modelling of radiobiological effect. In this study, Raman spectroscopy is presented as a potential tool for the detection of radiosensitivity subpopulations represented by four lymphoblastoid cell lines derived from individuals with ataxia telangiectasia (2 lines), non-Hodgkins lymphoma, and Turner's syndrome. These are classified with respect to a population with mixed radiosensitivity, represented by lymphocytes drawn from both healthy controls, and prostate cancer patients. Raman spectroscopic measurements were made ex-vivo after exposure to X-ray doses of 0 Gy, 50 mGy and 500 mGy, in parallel to radiation-induced G2 chromosomal radiosensitivity scores, for all samples. Support vector machine models developed on the basis of the spectral data were capable of discrimination of radiosensitive populations before and after irradiation, with superior discrimination when spectra were subjected to a non-linear dimensionality reduction (UMAP) as opposed to a linear (PCA) approach. Models developed on spectral data acquired on samples irradiated in-vitro with a dose of 0Gy were found to provide the highest level of performance in discriminating between classes, with performances of F1 = 0.92 ± 0.06 achieved on a held-out test set. Overall, this study suggests that Raman spectroscopy may have potential as a tool for the detection of intrinsic radiosensitivity using liquid biopsies.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
利用拉曼显微光谱学检测体内外辐射敏感亚群。
尽管近几十年来在了解获得性和遗传性放射敏感性的分子驱动因素方面取得了重大进展,但一种能够检测和分类放射敏感性的单一分析方法仍然难以捉摸。拉曼显微光谱学在各种疾病的客观分类以及最近在放射生物学效应的检测和建模方面已经证明了其能力。在这项研究中,拉曼光谱被认为是一种检测放射敏感性亚群的潜在工具,这些亚群由来自共济失调毛细血管扩张症(2系)、非霍奇金淋巴瘤和特纳综合征患者的四种淋巴母细胞样细胞系所代表。这些是根据混合放射敏感性人群进行分类的,以健康对照者和前列腺癌患者的淋巴细胞为代表。在暴露于0 Gy, 50 mGy和500 mGy的x射线剂量后,对所有样品进行拉曼光谱测量,与辐射诱导的G2染色体放射敏感性评分平行。基于光谱数据开发的支持向量机模型能够识别辐照前后的辐射敏感种群,当光谱经过非线性降维(UMAP)处理时,其识别能力优于线性(PCA)方法。研究发现,基于体外辐照剂量为0Gy的样品的光谱数据开发的模型在区分类别方面提供了最高水平的性能,在hold out测试集上实现了F1 = 0.92±0.06的性能。总的来说,这项研究表明,拉曼光谱可能有潜力作为一种工具,用于检测本征放射敏感性使用液体活检。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Frontiers in Oncology
Frontiers in Oncology Biochemistry, Genetics and Molecular Biology-Cancer Research
CiteScore
6.20
自引率
10.60%
发文量
6641
审稿时长
14 weeks
期刊介绍: Cancer Imaging and Diagnosis is dedicated to the publication of results from clinical and research studies applied to cancer diagnosis and treatment. The section aims to publish studies from the entire field of cancer imaging: results from routine use of clinical imaging in both radiology and nuclear medicine, results from clinical trials, experimental molecular imaging in humans and small animals, research on new contrast agents in CT, MRI, ultrasound, publication of new technical applications and processing algorithms to improve the standardization of quantitative imaging and image guided interventions for the diagnosis and treatment of cancer.
期刊最新文献
Incidence of severe immune-related adverse reactions in patients with HIV and cancer receiving immune checkpoint inhibitors: a systematic review and meta-analysis. Neuroblastoma in neonates: a case report and literature review. National trends and disparities in non-cancer mortality among older adults with oral cancer in the United States, 1999-2020. A deep learning model based on multiphase DCE-MRI for preoperative prediction of Ki-67 expression in breast cancer. Polymorphic low-grade neuroepithelial tumor of the young and treatment of epilepsy: a case report.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1